| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,410,289 | T→A | 5.5% | I320N (ATT→AAT) | nadA → | quinolinate synthase iron‑sulfur cluster subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,410,289 | 0 | T | A | 5.5% | 259.8 / 2.6 | 83 | I320N (ATT→AAT) | nadA | quinolinate synthase iron‑sulfur cluster subunit |
| Reads supporting (aligned to +/- strand): ref base T (38/40); new base A (3/2); total (41/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
AGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTCGCGGGCTCGCCCACTCCCACA > NC_002947/1410145‑1410433 | agcagTTGTGCCCTGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTc < 3:184814/149‑1 (MQ=255)agcagTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAGATTTTc < 4:189220/149‑1 (MQ=255)agcagTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTc < 3:228739/149‑1 (MQ=255)agcagTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTc < 7:257270/149‑1 (MQ=255)agcagTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTc < 3:262819/149‑1 (MQ=255) ttGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGa < 3:286725/149‑1 (MQ=255) ttGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGa < 5:129022/149‑1 (MQ=255) ttGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAAATTTCGTTgg < 4:235067/149‑2 (MQ=255) gtgCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAAATTTCGTTggt < 2:25736/148‑3 (MQ=255) ggACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGgcgc > 2:103862/1‑149 (MQ=255) aacgAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGt < 7:322384/146‑1 (MQ=255) aaGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGt > 6:208917/1‑149 (MQ=255) aaGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGt < 6:7446/149‑1 (MQ=255) aaGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGt > 3:229124/1‑149 (MQ=255) ggAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCTCCAACGAAATTTTCGTTGACCCGGCGCTGGTGc < 1:241114/149‑1 (MQ=255) ggAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGc < 8:71039/149‑1 (MQ=255) ggAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGc > 6:283560/1‑149 (MQ=255) ggAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGc > 7:294460/1‑149 (MQ=255) ggAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGc > 1:154916/1‑149 (MQ=255) ttCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCaa < 1:197377/149‑1 (MQ=255) gtcgAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAgg < 2:108283/148‑1 (MQ=255) gtcgAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTACGTTGACCCGGCGCTGGTGCCCAAGGc > 6:207459/1‑149 (MQ=255) tcgAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CCTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGc > 4:366804/1‑148 (MQ=255) gAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGATGTGAACCCCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGc > 1:303089/1‑148 (MQ=255) gAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGAt > 1:347534/1‑149 (MQ=255) gAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGAt > 3:164722/1‑149 (MQ=255) aaGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATc < 5:77343/149‑1 (MQ=255) gCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCaa < 2:154916/149‑1 (MQ=255) gCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCaa < 1:170044/149‑1 (MQ=255) cccccACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTGTCGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCaa < 1:103862/149‑1 (MQ=255) ccccACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGgcg < 5:8446/127‑1 (MQ=255) ccccACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGgcg > 6:8446/1‑127 (MQ=255) ccccACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGc < 5:283560/149‑1 (MQ=255) cccACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGcc > 5:34439/1‑149 (MQ=255) cccACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACAAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGcc > 7:208560/1‑149 (MQ=255) ccACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCg > 2:19841/1‑149 (MQ=255) ccACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCg < 2:75410/149‑1 (MQ=255) aCCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCt > 3:264853/1‑149 (MQ=255) cacagctgcgGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCa > 2:119946/8‑149 (MQ=255) aaCGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCAt > 4:344806/1‑149 (MQ=255) aCGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATg > 4:152746/1‑149 (MQ=255) aCGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATg > 4:158507/1‑149 (MQ=255) gcgGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGa < 2:347534/149‑1 (MQ=255) aTGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTa < 3:344806/149‑1 (MQ=255) cGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCa < 4:164722/149‑1 (MQ=255) aGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCAATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAggc < 8:294460/149‑1 (MQ=255) gcgcATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGgcggcgcg > 8:292431/1‑149 (MQ=255) ggctttGCGCGTGGAAGGCGA‑‑TTATCACCGTGGAGCGGGTGCTGGATACCCTG‑CGTAACGGCACCTAGGATATATTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCCCATGCTGGACTTTACCCAGgcggcgcgg < 4:312620/145‑1 (MQ=255) cgcATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGgcggcgcgg < 4:229124/149‑1 (MQ=255) cgcATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGgcggcgcgg < 1:19841/149‑1 (MQ=255) gCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGaa < 3:158507/148‑1 (MQ=255) gCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGaa < 3:152746/148‑1 (MQ=255) gCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CCTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGaa < 3:366804/148‑1 (MQ=255) ccGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCt < 2:38474/149‑1 (MQ=255) ggATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCt > 3:73852/1‑149 (MQ=255) aTGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTgg < 2:303089/149‑1 (MQ=255) tGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTgg > 2:236051/1‑148 (MQ=255) ccTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGc > 5:283459/1‑148 (MQ=255) ccTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGc > 1:54611/1‑148 (MQ=255) ccTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGc > 3:307503/1‑148 (MQ=255) gTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTc < 6:34439/149‑1 (MQ=255) gCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTAGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCa > 4:222656/1‑148 (MQ=255) tGGATTGCCTG‑CGTAACGGCACCTAAGAAATTTTCGTTGACCCGTCGCTGGTGCCAAAGGAGATAAAGCTGCTTAATCTCATGCTGGACTTTACGCAGGCGGCGCTGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGAGTCATAc < 4:232768/149‑1 (MQ=255) tGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCGCAAGGCGATCAAGCAGCTTAATCGCATGATGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCCCGTCATAc > 7:287448/1‑149 (MQ=255) tGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGAc < 8:51223/139‑1 (MQ=255) tGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGAc > 7:51223/1‑139 (MQ=255) tGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATAc > 6:102789/1‑149 (MQ=255) ggATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGTGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGa < 4:63703/137‑1 (MQ=255) ggATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGAGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGa > 3:63703/1‑137 (MQ=255) ccTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTcgc < 5:208917/149‑1 (MQ=255) ccTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTcgc > 6:205459/1‑149 (MQ=255) g‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTCGCggg > 6:2896/1‑149 (MQ=255) aaCGGCACCAACGAGATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGc > 7:320647/1‑113 (MQ=255) aaCGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGc < 8:320647/113‑1 (MQ=255) aCGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTCGCGGGCTCGc > 6:30325/1‑149 (MQ=255) tcAACGAAAATTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTaa > 6:35365/2‑55 (MQ=255) tcAACGAAAATTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTCGCGGGCTCGCCCACTc > 7:65188/2‑149 (MQ=255) cAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTCGCGGGCTCGCCCACTcc > 1:148833/1‑149 (MQ=255) cAACGAAAATTTCGTTTACCCGGCGCTCGTGCCCAAAGCAATCAAGCCGCATAATCGCATGCTGGACTTTACACACGCGGCGCGCCTGAAGCTATCTGGAAATGCCTGACGCCAGACCGCCTAAAACTCATCGCGGGCTCGCCCACTcc > 8:197141/1‑149 (MQ=255) aaCGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGAc < 4:168864/109‑1 (MQ=255) aaCGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGAc > 3:168864/1‑109 (MQ=255) cGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTCGCGGGCTCGCCCACTCCca > 3:365882/1‑148 (MQ=255) gAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTCGCGGGCTCGCCCACTCCcaca < 4:73852/149‑1 (MQ=255) | AGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGCCCGTGGATGGCGA‑‑TGAACACCCTGGAGCGGGTGCTGGATTGCCTG‑CGTAACGGCACCAACGAAATTTTCGTTGACCCGGCGCTGGTGCCCAAGGCGATCAAGCCGCTTAATCGCATGCTGGACTTTACCCAGGCGGCGCGGCTGAAGCTGTCTGGTAATGCCTGACGCCAGACCGCGTCATACTCTTCGCGGGCTCGCCCACTCCCACA > NC_002947/1410145‑1410433 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |