Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,425,661 G→A 6.5% intergenic (+63/‑442) PP_1249 → / → PP_1250 DUF4223 domain‑containing protein/group II intron‑encoding maturase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,425,6610GA 6.5% 280.5 / 5.0 92intergenic (+63/‑442)PP_1249/PP_1250DUF4223 domain‑containing protein/group II intron‑encoding maturase
Reads supporting (aligned to +/- strand):  ref base G (40/46);  new base A (3/3);  total (43/49)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01

CGACTACCTGTTCCACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGG  >  NC_002947/1425514‑1425807
                                                                                                                                                   |                                                                                                                                                   
cGACTACCTGTTCCACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGc                                                                                                                                                    <  2:28535/149‑1 (MQ=255)
  aCTACCTGTTCCACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCg                                                                                                                                                  <  2:192147/149‑1 (MQ=255)
  aCTACCTGTTCCACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGCCATGTGCATGACCg                                                                                                                                                  <  4:229529/149‑1 (MQ=255)
       cTGTTCCACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGt                                                                                                                                             >  4:130511/1‑149 (MQ=255)
       cTGTTCCACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGt                                                                                                                                             >  4:136083/1‑149 (MQ=255)
       cTGTTCCACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGGCATGCACATGGCCGGGGGt                                                                                                                                             >  4:51715/1‑149 (MQ=255)
            cgtcgcTTCGGTTTCTATCTCGAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCTGCTGGTGTAATGTTGGCGGTAGCCTGATCGCGACGCTTGTGTCGTGTTCCAAGGCCGCCTGTCATGCTGATGGGCGGGGGttttt                                                                                                                                         <  4:160789/143‑1 (MQ=255)
            ccACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGttttt                                                                                                                                         <  7:198066/148‑1 (MQ=255)
            ccACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGttttt                                                                                                                                         <  4:8152/148‑1 (MQ=255)
                ccTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTtgtgtg                                                                                                                                    >  5:82561/1‑149 (MQ=255)
                  ttCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTgcg                                                                                                                                  >  6:47353/1‑149 (MQ=255)
                     ggTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGcc                                                                                                                                <  7:312783/148‑1 (MQ=255)
                        ttCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAgg                                                                                                                             >  4:154505/1‑148 (MQ=255)
                            aTCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATgg                                                                                                                        >  4:48845/1‑149 (MQ=255)
                             tctcCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGc                                                                                                                                                    >  7:192016/1‑120 (MQ=255)
                             tctcCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGc                                                                                                                                                    <  8:192016/120‑1 (MQ=255)
                              ctcCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGgcg                                                                                                                      >  2:132718/1‑149 (MQ=255)
                               tcCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGgcgc                                                                                                                     >  8:291834/1‑149 (MQ=255)
                               tcCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGgcgc                                                                                                                     >  3:20109/1‑149 (MQ=255)
                                 cAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑Gt                                                                                                                  >  4:177860/1‑149 (MQ=255)
                                 cAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑Gt                                                                                                                  >  5:41768/1‑149 (MQ=255)
                                  aaGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCCGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCATGCCTGgcgcaca                                                                                                                  <  3:268325/149‑4 (MQ=255)
                                  aaGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑Gtt                                                                                                                 >  6:84523/1‑149 (MQ=255)
                                  aaGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGGCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑Gtt                                                                                                                 >  4:217351/1‑149 (MQ=255)
                                  aaGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGCCATGTGCATGACCgggg                                                                                                                                               <  5:312922/120‑1 (MQ=255)
                                  aaGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGCCATGTGCATGACCgggg                                                                                                                                               >  6:312922/1‑120 (MQ=255)
                                    gATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATTCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTgc                                                                                                               <  5:288913/149‑1 (MQ=255)
                                    gATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCa                                                                                                                           >  4:70192/1‑138 (MQ=255)
                                    gATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCa                                                                                                                           <  3:70192/138‑1 (MQ=255)
                                            gTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATgc                                                                                                       >  1:137935/1‑149 (MQ=255)
                                                  gCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAAcc                                                                                                 >  8:297202/1‑149 (MQ=255)
                                                   cGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCAGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAAc                                                                                                  <  4:18785/147‑1 (MQ=255)
                                                        cgatcgatAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGttttt                                                                                                                                         <  8:248766/104‑1 (MQ=255)
                                                        cgatcgatAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTg                                                                                           <  7:41636/149‑1 (MQ=255)
                                                         gatcgatAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTgg                                                                                          <  1:132718/149‑1 (MQ=255)
                                                             gatAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTtgt                                                                                      <  3:51715/149‑1 (MQ=255)
                                                             gatAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTtgt                                                                                      >  4:280858/1‑149 (MQ=255)
                                                               tAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTgtgg                                                                                    <  3:280858/149‑1 (MQ=255)
                                                                 aaCTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTgtggtg                                                                                  <  5:257193/149‑1 (MQ=255)
                                                                 aaCTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCAAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTgtggtg                                                                                  <  6:141049/149‑1 (MQ=255)
                                                                  aCTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGtggtgg                                                                                 >  3:333821/1‑149 (MQ=255)
                                                                  aCTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGtggtgg                                                                                 <  4:4526/149‑1 (MQ=255)
                                                                      ccTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCaa                                                                             <  5:292912/149‑1 (MQ=255)
                                                                      ccTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCaa                                                                             >  7:333403/1‑149 (MQ=255)
                                                                       cTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAg                                                                            >  4:279463/1‑149 (MQ=255)
                                                                        tCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGcc                                                                               <  5:339455/145‑1 (MQ=255)
                                                                        tCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGcc                                                                               >  6:339455/1‑145 (MQ=255)
                                                                          agcagcagTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTgg                                                                         >  3:151388/1‑149 (MQ=255)
                                                                               cagTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGAc                                                                    >  2:147639/1‑149 (MQ=255)
                                                                               cagTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGAc                                                                    >  7:343794/1‑149 (MQ=255)
                                                                                         ggCGGTACCCTTATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAg                                                              <  2:326787/145‑1 (MQ=255)
                                                                                         ggCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAg                                                              <  3:154505/145‑1 (MQ=255)
                                                                                         ggCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAg                                                              <  2:321676/145‑1 (MQ=255)
                                                                                           cGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                                        <  5:84523/149‑1 (MQ=255)
                                                                                            ggTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAg                                                       <  3:177860/149‑1 (MQ=255)
                                                                                             gTACCCTGATCGCGACGCTTGCGGCGTGATGCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTgg                                                                <  6:73856/139‑1 (MQ=255)
                                                                                             gTACCCTGATCGCGACGCTTGCGGCGTGATGCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTgg                                                                >  5:73856/1‑139 (MQ=255)
                                                                                                cccTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCct                                                   >  7:329430/1‑149 (MQ=255)
                                                                                                 ccTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                                                  >  2:343059/1‑149 (MQ=255)
                                                                                                 ccTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                                                  <  8:333403/149‑1 (MQ=255)
                                                                                                 ccTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                                                  <  4:20109/149‑1 (MQ=255)
                                                                                                 ccTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                                                  <  3:279463/149‑1 (MQ=255)
                                                                                                  cTGATAGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                                                  >  1:44877/1‑148 (MQ=255)
                                                                                                   tGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGAGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTa                                                >  5:88473/1‑149 (MQ=255)
                                                                                                     aTCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTaca                                              <  2:44877/149‑1 (MQ=255)
                                                                                                     aTCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTa                                                <  5:47353/147‑1 (MQ=255)
                                                                                                        gcgACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTacacac                                           >  5:352688/1‑149 (MQ=255)
                                                                                                               ttGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGc                                      >  7:8272/1‑147 (MQ=255)
                                                                                                               ttGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGc                                      >  7:137368/1‑147 (MQ=255)
                                                                                                                 gcggcgTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCCGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCaa                                    <  7:291834/147‑1 (MQ=255)
                                                                                                                  cggcgTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAgg                                  <  3:48845/148‑1 (MQ=255)
                                                                                                                       tGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAgt                            <  7:57483/149‑1 (MQ=255)
                                                                                                                         aTCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAgtgt                          <  7:297202/149‑1 (MQ=255)
                                                                                                                           ccAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGGAAGGGGAAgtgt                          >  5:285217/1‑147 (MQ=255)
                                                                                                                            cAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTa                        <  2:137935/148‑1 (MQ=255)
                                                                                                                               ggCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCg                    >  6:376181/1‑149 (MQ=255)
                                                                                                                               ggCCCCCGGTCATGCACATGGCCGGGGGTTTTCGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCg                    >  6:96262/1‑149 (MQ=255)
                                                                                                                                 cccccGGCCATGTGCATGACCGGGGGTTTTTGTGTGCGCCAGGCATGGCGCGGTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCgg                   >  2:184076/1‑149 (MQ=14)
                                                                                                                                  ccccGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAg                 <  4:151388/149‑1 (MQ=255)
                                                                                                                                   cccGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAgg                >  4:49786/1‑149 (MQ=255)
                                                                                                                                   cccGGCCATGTGCATGACCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCa                                                                              >  7:254782/1‑87 (MQ=14)
                                                                                                                                   cccGGCCATGTGCATGACCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCa                                                                              <  8:254782/87‑1 (MQ=14)
                                                                                                                                      ggTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCaa             <  6:82561/149‑1 (MQ=255)
                                                                                                                                       gTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAg            >  6:198763/1‑149 (MQ=255)
                                                                                                                                        tCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAgg           <  3:136083/149‑1 (MQ=255)
                                                                                                                                        tCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAgg           <  4:333821/149‑1 (MQ=255)
                                                                                                                                        tCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAgg           <  3:130511/149‑1 (MQ=255)
                                                                                                                                        tCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAgg           <  4:14395/149‑1 (MQ=255)
                                                                                                                                            gCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAg                 >  8:146533/1‑139 (MQ=40)
                                                                                                                                            gCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAg                 <  7:146533/139‑1 (MQ=40)
                                                                                                                                               caTGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTcgc    <  3:217351/149‑1 (MQ=38)
                                                                                                                                                 tGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCgg  <  5:198763/149‑1 (MQ=35)
                                                                                                                                                   |                                                                                                                                                   
CGACTACCTGTTCCACCCTTCGGTTTCCATCTCCAAGATCATCGGTGGCTGCGGCCCGATCGATAAACTGCCTCAGCAGCAGTAATCTTGGCGGTACCCTGATCGCGACGCTTGCGGCGTGATCCAAGGCCCCCGGTCATGCACATGGCCGGGGGTTTTTGTGTGCGCCAGGCATGGCGC‑GTTGCGCGTATGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGG  >  NC_002947/1425514‑1425807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑