| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,535,862 | A→C | 7.0% | N291H (AAC→CAC) | argJ → | glutamate N‑acetyltransferase/amino acid acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,535,862 | 0 | A | C | 7.0% | 261.2 / 8.9 | 86 | N291H (AAC→CAC) | argJ | glutamate N‑acetyltransferase/amino acid acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (33/47); new base C (3/3); total (36/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
GGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGAGCCTGATC > NC_002947/1535720‑1536008 | ggAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAaccacc < 1:335827/149‑1 (MQ=255) gAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTTGCCaccaccg < 6:19512/149‑2 (MQ=255) aaGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAg < 4:138620/149‑1 (MQ=255) gTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGa < 3:18381/149‑1 (MQ=255) gTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGa < 2:282973/149‑1 (MQ=255) gTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCATGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGa < 6:360789/149‑1 (MQ=255) tGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAg > 8:209048/1‑149 (MQ=255) gACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGt > 6:217331/1‑149 (MQ=255) ccAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAc > 8:319001/1‑149 (MQ=255) ccAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAc < 7:52869/149‑1 (MQ=255) cAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGT‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAc < 1:46610/148‑1 (MQ=255) cAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGT‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAc > 2:46610/1‑148 (MQ=255) cAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑g > 6:15308/1‑149 (MQ=255) aGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑Gt > 8:146096/1‑149 (MQ=255) gcggcgCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGTCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTc < 2:5465/149‑1 (MQ=255) gcggcgCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTc < 4:217696/149‑1 (MQ=255) gcggcgCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTc < 4:320429/149‑1 (MQ=255) cggcgCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCg < 7:319001/149‑1 (MQ=255) ggcgCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCgg < 1:211630/149‑1 (MQ=255) gcgcgcTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGc > 3:180025/1‑149 (MQ=255) cgcgcTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCt < 5:217331/149‑1 (MQ=255) ttttCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGcc > 4:346374/1‑149 (MQ=255) tCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGt < 7:1595/148‑1 (MQ=255) cTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGc > 5:93570/1‑143 (MQ=255) cTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGc < 6:93570/143‑1 (MQ=255) gAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTcgc > 4:151813/1‑149 (MQ=255) gAAAAAGGCCGTGTGCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGGGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTcgc < 7:56845/149‑1 (MQ=255) aaaaGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTcgccg < 1:279082/149‑1 (MQ=255) aaGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCt < 5:27837/149‑1 (MQ=255) aGGCCGTGTTCTAAGTGTGCATGGAAGTGGCCCTGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCTATTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCTGCTACTCCGTGGCCCACTCGCCGCTg < 5:175107/149‑1 (MQ=255) aGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTg < 7:146096/149‑1 (MQ=255) ggCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGa > 5:363060/1‑149 (MQ=255) gtgtTCGAAGTGTGCATAGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCaa < 1:86330/149‑1 (MQ=255) aaGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTcgc > 5:72922/1‑132 (MQ=255) aaGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTcgc < 6:72922/132‑1 (MQ=255) aGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACcgcg > 1:89062/1‑149 (MQ=255) gtgtGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCt > 3:125540/1‑149 (MQ=255) cATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCg > 7:241084/1‑149 (MQ=255) cATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCg > 7:254478/1‑149 (MQ=255) cATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCg > 7:90766/1‑149 (MQ=255) aTGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGc < 7:267538/149‑1 (MQ=255) aTGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGc < 7:272634/149‑1 (MQ=255) tGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCt > 5:47260/1‑149 (MQ=255) tGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCt > 5:179267/1‑149 (MQ=255) gAAGTGGCCCTGGCCTTCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCATCCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTc < 1:318908/149‑1 (MQ=255) gAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCCTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTc > 4:248539/1‑149 (MQ=255) tGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGAc < 6:359523/149‑1 (MQ=255) cccAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCg < 7:209048/149‑1 (MQ=255) cAGGCCAGCGGCCGTGACGGCGAAGGTGC‑GACCAAGGTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGaa < 6:58885/149‑1 (MQ=255) ccATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTgg < 1:17327/149‑1 (MQ=255) ccATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTgg < 2:142679/149‑1 (MQ=255) cATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTggg < 6:363060/149‑1 (MQ=255) gTCCGTGACGGGGATGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGACCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGcc < 6:326128/148‑1 (MQ=255) tCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCg > 4:171164/1‑148 (MQ=255) cGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCAt < 6:196296/149‑1 (MQ=255) cGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCAt > 5:107678/1‑149 (MQ=255) tGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATcc > 4:346008/1‑149 (MQ=255) aCGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTc < 2:89062/149‑1 (MQ=255) gCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATc < 8:134995/143‑1 (MQ=255) gCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATc > 7:134995/1‑143 (MQ=255) gAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTcgcca > 3:187208/1‑147 (MQ=255) gAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTcgcca < 4:187208/148‑2 (MQ=255) aaGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCgccgcc > 4:267679/1‑149 (MQ=255) aGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGccgccg < 5:15308/149‑1 (MQ=255) gTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTa < 8:90766/149‑1 (MQ=255) cAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTg > 2:262977/1‑149 (MQ=255) aaGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGc > 7:318070/1‑149 (MQ=255) gTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCg < 8:254478/149‑1 (MQ=255) gTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGgtgt < 6:179267/149‑1 (MQ=255) tGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTa < 3:346374/149‑1 (MQ=255) gTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGa < 6:46007/149‑1 (MQ=255) gTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGa < 8:249833/149‑1 (MQ=255) tGCAGGTCAACGGTGGTGGCAACCAACAGGAGTGCCTGGCC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCGGTTAGCTTCCGACCCGAAGGGGGGACGGATGCACGCCGCGATAGGCCGTGCCGGGTTACCGGAg > 8:317809/1‑149 (MQ=255) aGGTCAACGGTGGTGGCAACCACCATGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTg < 3:248539/149‑1 (MQ=255) aGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCGAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTg > 3:278763/1‑149 (MQ=255) actcctggtggtTGCCACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGa > 6:320958/7‑149 (MQ=255) ctcctggtggtTGCCACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGa > 2:88767/6‑142 (MQ=255) ctcctggtggtTGCCACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACACGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGa < 1:88767/137‑1 (MQ=255) aaCGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGAtgt < 6:47260/149‑1 (MQ=255) ctggtggtTGCCACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCg > 5:382407/3‑129 (MQ=255) ctggtggtTGCCACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCg < 6:382407/127‑1 (MQ=255) cGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGa < 6:38345/149‑1 (MQ=255) ggtggtGGCAACCACCAGGAGTGCCTGGACGGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGAtgt > 1:231870/1‑147 (MQ=255) tggCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGAGCCTGa > 8:5599/1‑149 (MQ=255) ggCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGAGCCTGAt < 3:267679/149‑1 (MQ=255) gCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCAGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGAGCCGGTGTACCGGAGCTGGATGTGAGCCTGATc > 8:242488/1‑149 (MQ=255) | GGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGC‑GACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGAC‑GTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGAGCCTGATC > NC_002947/1535720‑1536008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |