| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,555,389 | T→A | 8.2% | intergenic (+27/+47) | sbcB → / ← PP_1366 | exodeoxyribonuclease I/transcriptional regulator MvaT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,555,389 | 0 | T | A | 8.2% | 245.7 / 9.2 | 85 | intergenic (+27/+47) | sbcB/PP_1366 | exodeoxyribonuclease I/transcriptional regulator MvaT |
| Reads supporting (aligned to +/- strand): ref base T (38/40); new base A (4/3); total (42/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
TGGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGAT > NC_002947/1555241‑1555531 | tGGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAt > 1:247530/1‑149 (MQ=255) ttCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCg > 6:216280/1‑147 (MQ=255) cGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGc < 4:100226/147‑1 (MQ=255) aaGGCGCTCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGttttt < 6:331583/149‑1 (MQ=255) aaGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAACCAAAAACGCCGGCAAT‑GTGCCGGCGttttt < 6:337375/149‑1 (MQ=255) aaGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGttttt < 5:216280/149‑1 (MQ=255) aGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTttg < 6:296150/149‑1 (MQ=255) aGGCGCGCCAGCAAGCCTGGGAGGGCGACGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCACTCGGCTGATGGCAGATAAACAAAAACGCCGGCACA‑TTGCCGGCGTTTttg < 7:332738/149‑1 (MQ=255) gcgcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTttgtt < 4:42188/149‑1 (MQ=255) gcgcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTttgtt < 5:91293/149‑1 (MQ=255) gcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTtgttgt > 5:187440/1‑149 (MQ=255) gcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTCGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCAGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTtgttgt > 4:4405/1‑149 (MQ=255) gcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGc > 5:163559/1‑149 (MQ=255) ccAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGTCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGc > 1:67909/1‑149 (MQ=255) aGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCAATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGaa < 6:45638/149‑1 (MQ=255) aGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGc > 3:35285/1‑147 (MQ=255) ccTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCaa > 2:207894/1‑147 (MQ=255) tGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAgg < 4:274994/149‑1 (MQ=255) gAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCACGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCg < 4:299560/149‑1 (MQ=255) gAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCACGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCg > 3:299560/1‑149 (MQ=255) gcCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCg < 3:277791/149‑1 (MQ=255) gacgaGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGa > 8:26727/1‑148 (MQ=255) gaGGCAGGCAGG‑CGCGGGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAAt < 6:185009/149‑1 (MQ=255) ggcaggcagg‑cGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAAt > 2:380338/1‑147 (MQ=255) aggcagg‑cGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTc < 2:247530/149‑1 (MQ=255) gg‑cGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATCGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCcagc < 1:292910/149‑1 (MQ=255) gcgTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAggg > 8:64458/1‑149 (MQ=255) tgtTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTg < 6:187440/149‑1 (MQ=255) gtTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTttgttg < 5:337545/103‑1 (MQ=255) gtTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTttgttg > 6:337545/1‑103 (MQ=255) gtTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGc > 8:124601/1‑149 (MQ=255) ttGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGTAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGcc < 2:20699/149‑1 (MQ=255) gAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAg < 7:26727/149‑1 (MQ=255) ggCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCt < 2:10893/149‑1 (MQ=255) gCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCa < 8:102594/127‑1 (MQ=255) gCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCa > 7:102594/1‑127 (MQ=255) cTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGATGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑c < 3:4405/149‑1 (MQ=255) aaCTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCa > 2:86024/1‑149 (MQ=255) tGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATc < 6:321644/116‑1 (MQ=255) tGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATc > 5:321644/1‑116 (MQ=255) gCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTc > 7:191343/1‑149 (MQ=255) cATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTcg > 8:184270/1‑149 (MQ=255) cTCGACAATTCCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTcgccgc < 4:35285/149‑1 (MQ=255) tCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCgccgcc > 6:374155/1‑149 (MQ=255) cGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGt > 1:261563/1‑96 (MQ=255) cGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGt < 2:261563/96‑1 (MQ=255) gACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGccc > 8:29924/1‑148 (MQ=255) aaTTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATACGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAg > 2:113919/1‑149 (MQ=255) aGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCtt > 2:252038/1‑149 (MQ=255) aGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCtt < 2:67909/149‑1 (MQ=255) aGGAACGCTATTCAATCGCCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCCGATAAAAAGTACAGCAGGGTTGGCCAGCATT‑CCACCACGTCGCCGCCCCAAGTGGCtt > 3:3995/1‑149 (MQ=255) gAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTc < 7:64458/149‑1 (MQ=255) cGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCAc > 7:33862/1‑149 (MQ=255) tATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCActct > 4:296574/1‑149 (MQ=255) tATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCActct > 8:196564/1‑149 (MQ=255) tATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCActct > 7:128690/1‑149 (MQ=255) ttCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCtt < 1:380338/148‑1 (MQ=255) tgcactCGGCGGATGGCAGATAAACAAAACCGCCGGCAAT‑GTGCCGTCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCtt < 8:175157/143‑1 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCtt < 3:258749/136‑1 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCtt > 4:258749/1‑136 (MQ=255) gCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCt > 4:314186/1‑149 (MQ=255) gCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCt > 8:351221/1‑149 (MQ=255) cgatctgATAAACAAAAACGCCCGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgtg < 7:148346/143‑1 (MQ=255) aTGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgtg > 1:38395/1‑149 (MQ=255) tGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTgg < 8:191343/149‑1 (MQ=255) aTAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgtg > 8:148346/1‑142 (MQ=255) tAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTgccgc < 6:163559/149‑1 (MQ=255) aaaCAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTgccgcc > 3:150787/1‑149 (MQ=255) aaCAAAAACGCCGGCACA‑TTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCt > 1:176058/1‑149 (MQ=255) cAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCttt < 1:207894/149‑1 (MQ=255) acaaaCGCCGGCAAT‑GGGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGTCGTATTCGGATAATCAGTCCAGCAGGGTTGCACAGCTTT‑CAACCACGTCGCCGCCCCAATTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTg < 8:182642/147‑1 (MQ=255) aaaaaCGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTg > 6:377969/1‑149 (MQ=255) aaaaaCGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTg > 2:88743/1‑149 (MQ=255) aaaaaCGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTg < 2:235077/149‑1 (MQ=255) aaaaaCGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTg < 7:224125/149‑1 (MQ=255) aaaaCGCCGGCACA‑TTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCAGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTgg > 6:294718/1‑149 (MQ=255) aaaCGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGt > 4:213467/1‑149 (MQ=255) aCGCCGGCACA‑TTGCCGGTGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg < 7:19175/124‑1 (MQ=255) aCGCCGGCACA‑TTGCCGGTGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg > 8:19175/1‑124 (MQ=255) aCGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGttt < 3:213467/149‑1 (MQ=255) cGCCGGCACA‑TTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg > 3:213403/1‑123 (MQ=255) cGCCGGCACA‑TTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg < 4:213403/123‑1 (MQ=255) cGCCGGCAAT‑GTGCCGGGGTTTTTGGTGTGCGAAGCAATATGGCGTATACGGATAATCAGTCCATCAGGGTTGCCCATCTTTACAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGttt < 1:113919/149‑1 (MQ=255) ccGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGa < 7:124601/149‑1 (MQ=255) cGGCAAT‑GTGCCGGGGTTTTTGTTGTGCGAAGGAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGGTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGAt < 4:3995/149‑1 (MQ=255) cGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGAt > 5:92383/1‑149 (MQ=255) | TGGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGG‑CGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAT‑GTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTT‑CAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGAT > NC_002947/1555241‑1555531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |