| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,567,259 | A→T | 5.9% | intergenic (+63/‑258) | pcaR → / → pcaK | pca regulon transcriptional regulator/4‑hydroxybenzoate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,567,259 | 0 | A | T | 5.9% | 256.1 / 4.8 | 85 | intergenic (+63/‑258) | pcaR/pcaK | pca regulon transcriptional regulator/4‑hydroxybenzoate transporter |
| Reads supporting (aligned to +/- strand): ref base A (41/39); new base T (3/2); total (44/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.16e-01 | |||||||||||
GGGTGACCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCGCATG > NC_002947/1567111‑1567407 | gggTGACCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATaaa < 4:184750/149‑1 (MQ=255) ggTGACCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAAc < 1:115508/149‑1 (MQ=255) aCCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGca < 8:15646/148‑1 (MQ=255) cccGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGTTTATCGcaca < 6:376726/149‑1 (MQ=255) cccGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGcaca < 1:176983/149‑1 (MQ=255) ccGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGTTTATCGCACAg < 8:243864/149‑1 (MQ=255) ccGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTAGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAg > 6:154114/1‑149 (MQ=255) cGCATTGAACTCGAGCAGCGGTTCTTGCCGAATTTGCTCGCAGCCACCCGGGACCATTCACCACAGATGTTTGGTTGAGACCGCAGCCAGCACTATCCGGCCCCGGAACAGAACAGGCAAACCCGTTACCTCTGACATAAACCAACAg > 8:47652/1‑148 (MQ=255) aaCTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGc > 1:52463/1‑149 (MQ=255) gAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑ggg < 4:6088/148‑1 (MQ=255) gAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑gg < 1:186378/147‑1 (MQ=255) agcagcGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTg < 7:290351/149‑1 (MQ=255) gcagcGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTg > 1:340775/1‑148 (MQ=255) agcGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGcc < 3:228338/141‑1 (MQ=255) agcGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGcc > 4:228338/1‑141 (MQ=255) agcGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAAt > 4:239995/1‑149 (MQ=255) agcGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAAt < 1:263918/149‑1 (MQ=255) ggTTCTTGGCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGc < 2:340775/149‑1 (MQ=255) ttCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGt > 3:159942/1‑149 (MQ=255) ttGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCAc > 8:189802/1‑149 (MQ=255) gCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCa < 3:236479/146‑1 (MQ=255) ccGCTTTTGCTGGCAGCCAGCCGGGACCTGTGCCACCAGGTGTTGGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATACACGCACAGTGTCGTGCC‑GGGTGAAGTGCGTCCCCTc > 6:298103/1‑149 (MQ=255) ccGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTc > 5:215824/1‑149 (MQ=255) gATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTcgg < 6:215824/149‑1 (MQ=255) ttGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGCACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTcggccg < 5:266540/148‑1 (MQ=255) cTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCt > 7:46047/1‑148 (MQ=255) tGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGa > 6:7856/1‑149 (MQ=255) tGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGa > 5:57026/1‑149 (MQ=255) gCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGAt > 4:202340/1‑148 (MQ=255) gccagccGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACAGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAAt < 6:283119/149‑1 (MQ=255) cagccGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGt > 4:87628/1‑149 (MQ=255) agccGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGtc > 1:373188/1‑149 (MQ=255) gggACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGtctctc < 1:75149/149‑1 (MQ=255) gggACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGtctctc > 8:71881/1‑149 (MQ=255) gACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCg > 8:345263/1‑148 (MQ=255) ccaccaGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCg > 3:368830/1‑149 (MQ=255) ccaccaGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCg > 8:60609/1‑149 (MQ=255) ccaGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGc > 2:323935/1‑148 (MQ=255) gttgttTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGc < 3:202340/149‑1 (MQ=255) gttTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGCCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccga > 2:325583/1‑149 (MQ=255) tttGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgac < 4:159942/149‑1 (MQ=255) ttGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgacc > 4:371970/1‑149 (MQ=255) ttGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgacc > 1:56852/1‑149 (MQ=255) gTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgaccgtt < 8:46047/149‑3 (MQ=255) gTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgaccgtt < 7:189802/149‑3 (MQ=255) gTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgaccgtt < 6:57026/149‑3 (MQ=255) gTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGaa > 2:13118/1‑149 (MQ=255) gTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGaa < 7:345263/149‑1 (MQ=255) agaCCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACaa < 7:60609/148‑1 (MQ=255) gaCCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAg > 4:79359/1‑148 (MQ=255) gaCCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAg > 6:230549/1‑148 (MQ=255) aCCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGa > 3:362037/1‑148 (MQ=255) aCCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATCTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGaa < 4:333852/149‑1 (MQ=255) ccGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGaa > 5:372427/1‑148 (MQ=255) cGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGaaa > 6:285072/1‑148 (MQ=255) gCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGaaaaa < 5:7856/149‑1 (MQ=255) ggAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAacac > 1:97867/1‑148 (MQ=255) ggAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACt < 8:140541/149‑1 (MQ=255) ccccGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCactcactc < 2:52463/149‑1 (MQ=255) ccGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCAt < 6:166754/149‑1 (MQ=255) cGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATg < 2:373188/149‑1 (MQ=255) ggATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGa < 5:154114/149‑1 (MQ=255) aTCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACACACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAAt < 6:138523/149‑1 (MQ=255) tCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATa < 1:13118/149‑1 (MQ=255) tCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATa > 5:265571/1‑149 (MQ=255) aGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATAc < 3:87628/148‑1 (MQ=255) aGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACt < 6:372427/149‑1 (MQ=255) gAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGcactca < 8:94890/136‑1 (MQ=255) gAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGcactca > 7:94890/1‑136 (MQ=255) gAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTg > 2:263404/1‑149 (MQ=255) gAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCCGCTGATTAATGTCTCTCGCAACTGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTAATCAAAACTg > 6:296132/1‑149 (MQ=255) aCAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTc < 3:371970/149‑1 (MQ=255) ggCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCAcc > 1:363020/1‑149 (MQ=255) ggCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATAATGTCAcc > 4:168839/1‑149 (MQ=255) aaaaCCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTAACCTc > 6:252127/1‑148 (MQ=255) aaaCCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCgc < 3:239995/149‑1 (MQ=255) acTGTGCGTTTATCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGc > 4:46634/2‑149 (MQ=255) cTGTGCGTTTATCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGcc > 7:159944/1‑149 (MQ=255) cTGTGCGTTTATCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGcc > 7:315301/1‑149 (MQ=255) cTGTGCGATAAACGCACAGTGTCGTGCCGGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGaa > 1:23395/1‑94 (MQ=255) cTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGaa < 2:23395/93‑1 (MQ=255) cTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAac > 2:136709/1‑103 (MQ=255) cTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAac < 1:136709/103‑1 (MQ=255) cGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCAc < 5:230549/148‑1 (MQ=255) gATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATa > 2:237791/1‑121 (MQ=255) gATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATa < 1:237791/121‑1 (MQ=255) aaaCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCGc < 1:323935/148‑1 (MQ=255) aaaCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCGCa > 8:302762/1‑149 (MQ=255) aaCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCGCAt < 7:71881/149‑1 (MQ=255) aaCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCGCAt > 6:179541/1‑149 (MQ=255) aaCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCGCAt < 2:97867/149‑1 (MQ=255) aCGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCGCATg < 6:265571/149‑1 (MQ=255) | GGGTGACCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGGCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCC‑GGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCGCATG > NC_002947/1567111‑1567407 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |