| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,685,607 | T→C | 7.0% | D391G (GAT→GGT) | patD ← | medium chain aldehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,685,607 | 0 | T | C | 7.0% | 203.1 / 4.7 | 71 | D391G (GAT→GGT) | patD | medium chain aldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (21/45); new base C (2/3); total (23/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-01 | |||||||||||
GCTGACCAGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTACCAGACGAATGTGC > NC_002947/1685459‑1685753 | gCTGACCAGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCAt > 4:61519/1‑149 (MQ=255)gCTGACCAGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCAt > 3:113074/1‑149 (MQ=255)gCTGACCAGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCAt > 5:71041/1‑149 (MQ=255) gccAGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCgg < 1:270728/147‑1 (MQ=255) cAGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCg < 8:53801/145‑1 (MQ=255) cAGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCg > 7:53801/1‑145 (MQ=255) aGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGaa < 2:10666/149‑1 (MQ=255) tgatctGGGTAATCACCCAGGTGCAGACATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCgg < 8:90425/144‑1 (MQ=255) tGAAGTGGGTATTCACCGAGGTGCAGGCATACTGCAAGCGCGCCGCCAGGGGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCGGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCACCGATGAAGCgc < 4:355469/149‑2 (MQ=255) aaGTGGGTATTCACCCAGTTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCggg < 5:353160/148‑1 (MQ=255) aaGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCggg < 8:149250/148‑1 (MQ=255) aaGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGt < 7:277325/149‑1 (MQ=255) aGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGt < 2:320890/148‑1 (MQ=255) aGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCACCGATGAAGCgcagg < 2:38967/149‑5 (MQ=255) aGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCACCGATGAAGCgcagg < 3:134360/149‑5 (MQ=255) gTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTTGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGa > 6:363517/1‑149 (MQ=255) tGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGAc > 2:181633/1‑149 (MQ=255) cACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAacca > 8:184934/1‑149 (MQ=255) ccAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCg < 4:358653/149‑1 (MQ=255) ccAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCg > 8:107839/1‑149 (MQ=255) cAGGTGCAGCCATACTGCCAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGGCGCGGGGCCATACCGATGCGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCgg < 1:363523/149‑1 (MQ=255) aGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTTCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAac < 1:73511/149‑1 (MQ=255) cATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACt < 6:121620/149‑1 (MQ=255) aCTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCg > 2:334500/1‑149 (MQ=255) gCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTg > 7:144178/1‑149 (MQ=255) cAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGtt < 1:181633/147‑1 (MQ=255) cAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGtt < 5:360239/147‑1 (MQ=255) cAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGtt < 7:184934/147‑1 (MQ=255) cAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGtt < 7:326328/147‑1 (MQ=255) cAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTgc < 6:6639/149‑1 (MQ=255) aaGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTgcg > 4:177827/1‑149 (MQ=255) cgccgcCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCATGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACATCGTTGCG‑CACGa > 3:257853/1‑149 (MQ=255) cgccgcCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGa < 3:61519/149‑1 (MQ=255) ccgccAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGGTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGAtc < 4:157869/149‑1 (MQ=255) cgccAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGAtct > 1:236122/1‑149 (MQ=255) ggTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTcc > 3:354774/1‑149 (MQ=255) cgGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCACATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGc < 6:71041/149‑1 (MQ=255) gCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGt < 3:213527/149‑1 (MQ=255) ccGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCGCCACGATCTCGTCGTCCTGCAGGGCGt < 1:196279/149‑1 (MQ=255) ggTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCgg < 2:80350/149‑1 (MQ=255) tCGCGGGTCCATACCGATGCGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCa < 3:200814/148‑1 (MQ=255) gggTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCG‑TGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACgg < 1:136507/149‑1 (MQ=255) cATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAg < 1:334500/148‑1 (MQ=255) tACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCt < 5:210805/149‑1 (MQ=255) aCCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTAGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTc > 6:25025/1‑149 (MQ=255) gATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCgaa < 5:176284/149‑1 (MQ=255) gccGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCAt < 4:354774/149‑1 (MQ=255) ccGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATc < 8:144178/149‑1 (MQ=255) cGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCg > 5:130660/1‑149 (MQ=255) tAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCgaa > 5:66658/1‑134 (MQ=255) tAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCgaa < 6:66658/134‑1 (MQ=255) gTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGAtctc < 2:74753/93‑1 (MQ=255) gTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGAtctc > 1:74753/1‑93 (MQ=255) gTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCg < 7:107839/149‑1 (MQ=255) gTTGGAGGCGTTGGCCCATTCCAGTGCCTGCTCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑GACGATCTGGGCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCg < 5:377190/149‑1 (MQ=255) ttGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGc < 8:217889/113‑1 (MQ=255) ttGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGc > 7:217889/1‑113 (MQ=255) ggAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTa > 2:20402/1‑149 (MQ=255) gAGTCGTTGGCCCATTCCTGTGCGTGGTCTTCATCGGTGAAGCGGGTGACCTAAACCTCGGGGCCAAACACTTCGTTGCG‑AACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTATGCTCGAAGAAAAAGCCATCGCCCGCTa < 3:39770/148‑1 (MQ=255) aGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTAtt < 5:363517/149‑1 (MQ=255) gTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTg < 8:29534/149‑1 (MQ=255) ttGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCtt < 2:256249/149‑1 (MQ=255) ggCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTg < 7:34298/148‑1 (MQ=255) gCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGc < 1:20402/148‑1 (MQ=255) aTTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCg < 2:236122/149‑1 (MQ=255) cAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTa > 8:261795/1‑149 (MQ=255) aGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTAc < 3:177827/149‑1 (MQ=255) gTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTAc > 3:81771/1‑148 (MQ=255) cgCCTGCTCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTACCa < 4:106091/148‑1 (MQ=255) tGCGCTTCATCGGTGAAGCGGGTGACCGAAACCCCCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTACCAGAc > 5:119183/1‑148 (MQ=255) tGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTACG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTACCAGAc > 2:253605/1‑148 (MQ=255) ccgcTTCACCGATGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTACCAGACg > 2:41543/2‑148 (MQ=255) ccgcTTCACCGATGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTACCAGACg > 1:337324/2‑148 (MQ=255) aTCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTACCAGACGAATGTGc < 4:113074/148‑1 (MQ=255) | GCTGACCAGCATGAAGTGGGTATTCACCCAGGTGCAGCCATACTGCAAGCGCGCCGCCAGGCGGTGGGCGCGGCCGGTGTCGCGGGTCCATACCGATGAGGCCAGGCCGTAGTTGGAGTCGTTGGCCCATTCCAGTGCCTGCGCTTCATCGGTGAAGCGGGTGACCGAAACCACCGGGCCAAACACTTCGTTGCG‑CACGATCTCGTCGTCCTGCAGGGCGTCGGCCAGCACGGTAGGCTCGAAGAAAAAGCCATCGCCCGCTATTGGCTTGCCACCGGTTACCAGACGAATGTGC > NC_002947/1685459‑1685753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |