| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,694,776 | G→C | 5.5% | G248R (GGC→CGC) ‡ | wspC → | biofilm formation methyltransferase WspC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,694,776 | 0 | G | C | 5.5% | 233.1 / 3.5 | 72 | G248R (GGC→CGC) ‡ | wspC | biofilm formation methyltransferase WspC |
| Reads supporting (aligned to +/- strand): ref base G (40/28); new base C (2/2); total (42/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
CCTGTATGACTTCGTGTTCTGTCGCAACCTGTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTG > NC_002947/1694628‑1694919 | ccTGTATGACTTCGTGTTCTGTCGCAACCTGTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATgg < 5:237660/149‑1 (MQ=255) aCTTCGTGTTCTGTCGCAACCTGTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGt > 3:281126/1‑149 (MQ=255) gtgtTCTGTCGCAACCTGTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGCCCATGCGtgcca < 2:115399/148‑5 (MQ=255) cTGTCGCAACCTGTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTgggg < 4:281126/148‑1 (MQ=255) gCAACCTGTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGcc > 8:239839/1‑149 (MQ=255) aaCCTGTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCa < 6:224282/149‑1 (MQ=255) gTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGt > 2:314008/1‑149 (MQ=255) cTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTTCTGCATACGCAGGGTGTGCTGTTCATAGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGAGTCCATTGGGGAACGCCCAGTCGTTTGcc > 7:14239/1‑148 (MQ=255) tttCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTAtg > 5:246155/1‑149 (MQ=255) tggACGTACGGACCCAACAGCGTGGGTTCGAAGTGCTGAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTGCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTAtgt < 8:336512/146‑1 (MQ=255) gACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCTCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTg < 7:208797/139‑1 (MQ=255) gACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCTCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTg > 8:208797/1‑139 (MQ=255) gACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCg > 2:330033/1‑149 (MQ=255) aCCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCAc > 5:12314/1‑148 (MQ=255) ccGACCCAACAGCGTGTGTTCTAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGttt > 2:191230/1‑132 (MQ=255) ccGACCCAACAGCGTGTGTTCTAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGttt < 1:191230/132‑1 (MQ=255) aCCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGaccc < 7:239839/149‑4 (MQ=255) cccAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGc < 2:15857/149‑1 (MQ=255) cAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGa > 5:49155/1‑149 (MQ=255) aaCAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGCCCATGCGtgc < 6:164316/103‑3 (MQ=255) aaCAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGCCCATGCGtgc > 5:164316/1‑101 (MQ=255) aCAGCGTGTGTTCGATGTGCTCAAGCGCTTGCTGCATCCGGAGGGTGTGCTGTTCTTCGGCGCGGCCTAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCGATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACa < 3:15217/149‑1 (MQ=255) aCAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCAAGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGGCACGAAGTCGACa < 6:16808/149‑1 (MQ=255) cGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAgcgc > 6:381096/1‑149 (MQ=255) tgtTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTccc > 3:226168/1‑149 (MQ=255) ttCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGc < 8:77722/116‑1 (MQ=255) ttCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGc > 7:77722/1‑116 (MQ=255) ttCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCtt > 2:263631/1‑149 (MQ=255) ttCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCtt > 1:208185/1‑149 (MQ=255) tCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACACATGGGCATGCGTCCATTGGGGATCGCCCAGTCGttt < 2:256947/113‑1 (MQ=255) tCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACACATGGGCATGCGTCCATTGGGGATCGCCCAGTCGttt > 1:256947/1‑113 (MQ=255) gAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGTAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTggc > 3:214948/1‑149 (MQ=255) tGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTggcggcg < 6:246155/149‑1 (MQ=255) cTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTggcggcggc > 2:33019/1‑149 (MQ=255) tCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTggcgggtgcc > 7:2124/1‑144 (MQ=255) tCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTggcattgtga > 1:325326/1‑142 (MQ=255) aGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTc > 8:39659/1‑97 (MQ=255) aGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTc < 7:39659/97‑1 (MQ=255) cTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGccc < 1:177842/149‑1 (MQ=255) ttGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGccc > 6:234416/1‑148 (MQ=255) ttGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGccc > 8:49716/1‑148 (MQ=255) aTCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGtt < 7:62484/88‑1 (MQ=255) aTCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGtt > 8:62484/1‑88 (MQ=255) aTCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGc > 4:344488/1‑148 (MQ=255) gCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAgc < 3:344488/149‑1 (MQ=255) gCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAgc > 3:209687/1‑149 (MQ=255) aGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAgcgt < 6:49155/149‑1 (MQ=255) gggTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAgcgtg > 5:344489/1‑149 (MQ=255) tgCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGtt < 4:226168/148‑1 (MQ=255) cTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCa < 5:381096/148‑1 (MQ=255) cTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCa < 2:208185/148‑1 (MQ=255) gTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGCAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCacga > 6:63013/1‑149 (MQ=255) gTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCAAGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCacga > 1:173649/1‑149 (MQ=255) aTCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGtt > 2:81788/1‑149 (MQ=255) ggcccggccGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGcc > 8:223415/1‑149 (MQ=255) gcccggccGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGccc > 4:112021/1‑149 (MQ=255) gcccggccGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGccc > 4:197221/1‑149 (MQ=255) gcccggcaGAATGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGccc < 8:14239/149‑1 (MQ=255) cccggccGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTc > 1:366189/1‑136 (MQ=255) cccggccGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTc < 2:366189/136‑1 (MQ=255) ccggccGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCTCTCCCTTGGCGGCGGCCACCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGc > 3:26003/1‑149 (MQ=255) ggccGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGCAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCAc > 4:86629/1‑149 (MQ=255) ggccGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCAc > 7:100741/1‑149 (MQ=255) aaGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGtt < 7:49716/149‑1 (MQ=255) cTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCaaa < 3:74750/104‑1 (MQ=255) cTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCaaa > 4:74750/1‑104 (MQ=255) gCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGc > 6:197177/1‑149 (MQ=255) caatggaCGCATGCCCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGc > 3:323380/7‑149 (MQ=255) cTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGcc < 5:234416/149‑1 (MQ=255) gCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCa < 6:12314/148‑1 (MQ=255) gCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAg > 7:281690/1‑149 (MQ=255) cACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAgt < 1:314008/149‑1 (MQ=255) cACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAgt < 2:173649/149‑1 (MQ=255) gcatgcgcatgcGTCCATTGGCGATCGCCCAGTCGTTTGCCTATCTGCGTCACGAAGCCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCCGTTTATCCGCAGCCCAGtgtg > 7:83606/1‑149 (MQ=255) | CCTGTATGACTTCGTGTTCTGTCGCAACCTGTTGATCTATTTCGACGTACCGACCCAACAGCGTGTGTTCGAAGTGCTCAAGCGCTTGCTGCATCCGCAGGGTGTGCTGTTCATCGGCCCGGCCGAAGGCAGCTTGCTGGCACGCATGGGCATGCGTCCATTGGGGATCGCCCAGTCGTTTGCCTATGTGCGTCACGAAGGCGACAGCGCTCCCTTGGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTG > NC_002947/1694628‑1694919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |