| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,786,024 | T→A | 14.2% | intergenic (+40/‑146) | rpsB → / → tsf | 30S ribosomal protein S2/elongation factor Ts |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,786,024 | 0 | T | A | 14.2% | 187.8 / 18.3 | 76 | intergenic (+40/‑146) | rpsB/tsf | 30S ribosomal protein S2/elongation factor Ts |
| Reads supporting (aligned to +/- strand): ref base T (39/26); new base A (6/5); total (45/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAGCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTGAAAT > NC_002947/1785877‑1786171 | gAGCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTg > 6:47948/1‑149 (MQ=255) gCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGcc < 4:265984/149‑1 (MQ=255) gCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGcc > 7:308776/1‑149 (MQ=255) tACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCt > 1:11874/1‑149 (MQ=255) tACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCt > 3:87083/1‑149 (MQ=255) cATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCttt > 4:104198/1‑149 (MQ=255) aTGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCtttt > 8:276280/1‑149 (MQ=255) aTGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCtttt > 6:24237/1‑149 (MQ=255) tGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCAAAGCCCCCttttt < 4:346208/149‑1 (MQ=255) tGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCAAAGCCCCCttttt < 2:115524/149‑1 (MQ=255) tGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCAAAGCCCCCttttt < 8:116730/149‑1 (MQ=255) gACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTg > 1:225178/1‑149 (MQ=255) ttCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTATACTTGGCACGCAAAAAGGGGGCTTTTCCACCTTTTTGcaa > 7:333177/1‑147 (MQ=255) tGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAAt > 4:339776/1‑149 (MQ=255) tGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAAt > 6:362921/1‑149 (MQ=255) gCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCctg < 2:58509/149‑1 (MQ=255) gCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCctg > 3:203785/1‑149 (MQ=255) gCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCctg > 1:96489/1‑149 (MQ=255) tCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGt < 5:47948/149‑1 (MQ=255) tCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGt < 5:24237/149‑1 (MQ=255) tCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCAAAGCCCCCTTTTTGcgt < 4:317051/132‑3 (MQ=255) tCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCAAAGCCCCCTTTTTGcgt > 3:317051/1‑130 (MQ=255) gCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGccc > 3:304602/1‑149 (MQ=255) aacaacGTTGCCGGCGGCACCGAAGTTTACGCTGGAGAAGCGGCTGCACATGCTGCAGAGTAATAGGCGCTAGC‑GTCAACTTGGCACGCAAAAAGGGGGCAAAGCCCCCttttt > 5:384093/1‑114 (MQ=255) gCCGGCGGCACCGTAGTTTACGGTGCAGATGCGTCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCGCTTTTTGCCACCTTGAAATCCTTCTGTCAGCATCGGCCCCGCATCATgg < 8:333177/148‑1 (MQ=255) gCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATgg < 2:96489/148‑1 (MQ=255) ccGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGTGc > 4:241870/1‑149 (MQ=255) ggcggcACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCct < 4:255404/149‑1 (MQ=255) cggcACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCctgc < 7:276280/149‑1 (MQ=255) ggcACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCctgct < 2:225178/149‑1 (MQ=255) cACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCatggtg > 2:182072/1‑148 (MQ=255) aCCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCtga > 2:93766/1‑148 (MQ=255) ccGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCtgaaa < 2:11874/149‑1 (MQ=255) aaGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCtgaaatg > 7:286877/1‑148 (MQ=255) aaGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCtgaaatg > 4:4102/1‑148 (MQ=255) gTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACACAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGcatc < 4:183553/129‑1 (MQ=255) gTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACACAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGcatc > 3:183553/1‑129 (MQ=255) tttACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGaaaa > 7:349096/1‑149 (MQ=255) gaagaaGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGAt > 2:328967/1‑149 (MQ=255) agCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCa < 3:339776/149‑1 (MQ=255) agCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCCGCTGAAATGAAAACA‑GCGGATTTGCa < 4:304602/149‑1 (MQ=255) ggCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAg > 1:51399/1‑148 (MQ=255) gCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAAt > 1:85093/1‑149 (MQ=255) cACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGa < 5:362921/148‑1 (MQ=255) cACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGa < 1:328967/148‑1 (MQ=255) cACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGa < 8:308776/148‑1 (MQ=255) ctgctgctgAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCctgct < 2:359665/84‑1 (MQ=255) ctgctgctgAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCctgct > 1:359665/1‑84 (MQ=255) tgctgctgAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGcc > 4:173715/1‑149 (MQ=255) tgAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGAt > 7:78989/1‑149 (MQ=255) tgAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGAt > 5:223744/1‑149 (MQ=255) tgAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTAAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGAt > 2:178189/1‑149 (MQ=255) gAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGAtt > 1:168805/1‑149 (MQ=255) aGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGAtt > 7:284604/1‑148 (MQ=255) aaTATGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGAc < 3:4102/148‑1 (MQ=255) aTAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTATCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACgg > 4:42717/1‑149 (MQ=255) tgctcTAGC‑GTCAACTTGGCACGCAAAAAGGGGTCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCTCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACTCCCGTGATTGACGGGt < 8:349096/144‑1 (MQ=255) ggCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTATCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTg < 3:42717/149‑1 (MQ=255) tAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATg > 3:185256/1‑149 (MQ=255) cTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACACGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGaaa < 1:93766/148‑1 (MQ=255) tGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACt > 5:176785/1‑149 (MQ=255) gCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACtt < 2:316951/148‑1 (MQ=255) cACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTc < 4:87083/149‑1 (MQ=255) cACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTc < 3:173715/149‑1 (MQ=255) ggCAAAAAGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTcc > 6:319006/2‑148 (MQ=255) cAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTcc > 1:223146/1‑146 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGaa > 2:267477/1‑106 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCaa > 5:62167/1‑147 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCaa > 6:57976/1‑147 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAaga < 2:168805/149‑1 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGAATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGaa < 1:267477/106‑1 (MQ=255) aaaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCaa > 5:34681/1‑147 (MQ=255) aaaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCaa > 5:343735/1‑147 (MQ=255) aaaaaGCGGCCTTTGCCCCCTTTTTCCCACCTTGAAAACCTGCTGTCAGCATCCGCCCCGCATCATGGGCCTGCTGAAATCAAAACA‑GCGGATTTGCAGAATTGAACCCCCGACATTGACGGGTGGAAAGGTTGAAAAACTTTCCaa > 8:249880/1‑147 (MQ=255) aaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGt > 6:55644/1‑123 (MQ=255) aaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGt < 5:55644/123‑1 (MQ=255) tGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTGaaa < 3:241870/147‑1 (MQ=255) tGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTGAAAt < 4:185256/148‑1 (MQ=255) | GAGCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGC‑GTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACA‑GCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTGAAAT > NC_002947/1785877‑1786171 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |