| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,814,540 | C→G | 5.9% | intergenic (+40/‑73) | frmC → / → ispF | S‑formylglutathione hydrolase/S‑lactoylglutathione hydrolase/2‑C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,814,540 | 0 | C | G | 5.9% | 256.6 / 3.1 | 79 | intergenic (+40/‑73) | frmC/ispF | S‑formylglutathione hydrolase/S‑lactoylglutathione hydrolase/2‑C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase |
| Reads supporting (aligned to +/- strand): ref base C (33/41); new base G (2/3); total (35/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01 | |||||||||||
CAATGACCCTGCGTATGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTGGGCGGGGTGCGTA > NC_002947/1814394‑1814685 | cAATGACCCTGCGTATGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCTGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAcag < 1:110758/149‑1 (MQ=255) tGACCCTGCGTATGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAcagcag < 4:30330/149‑1 (MQ=255) ccTGCGTATGCAGCCAGGCTATGACCATAGGTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGccc > 1:31546/1‑148 (MQ=255) ccTGCGTATGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGccc > 4:31351/1‑148 (MQ=255) cTGCGTATGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTGTGCAGccctt < 1:339669/149‑3 (MQ=255) tGCGTATGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCaa > 5:63793/1‑149 (MQ=255) tGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCca < 1:213691/148‑1 (MQ=255) tGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCca < 7:173757/148‑1 (MQ=255) tGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGCGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCca < 4:316308/148‑1 (MQ=255) agacAGGCTATGACGATAGCTACTACTTCATTGCCAGGTTGATCGAGTAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTATCGCCTCCTGTGGGAGCGGGCGTGCCCGCGATGGGCTGCTGAGCAGCCCCAATGCCACtaa < 2:227666/146‑1 (MQ=37) aGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATccc < 3:44222/149‑1 (MQ=255) aGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATccc < 3:125379/149‑1 (MQ=255) tATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCca < 4:146158/137‑1 (MQ=255) tATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCca > 3:146158/1‑137 (MQ=255) ccATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAg > 8:82613/1‑148 (MQ=255) cATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCa < 7:82613/149‑1 (MQ=255) aGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAgg > 2:350507/1‑148 (MQ=255) gCTACTACTTCATTGTCAGCTTCCTAGAGGAGCACCTGCGCCATCATGCGGTGGCACTTTGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTa < 8:140791/149‑1 (MQ=38) ctactTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAAt < 3:31351/149‑1 (MQ=255) tactTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAAt > 6:128540/1‑148 (MQ=255) tactTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAAt > 5:175520/1‑148 (MQ=255) tactTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAAt > 1:271953/1‑148 (MQ=255) tactTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAACCAGCTAGAAt > 6:186078/1‑148 (MQ=255) ctTCATTGCCATCTTCATCGAGGATCACCTGCGCCATCATGCGGTGGGACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCAc < 8:53611/149‑1 (MQ=255) ctTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATc < 8:176471/147‑1 (MQ=255) ttCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCCCg > 5:38829/1‑149 (MQ=255) tCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGc > 5:268256/1‑149 (MQ=255) cATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGcc > 8:257857/1‑149 (MQ=255) aTTGTCATCTTCATCGATGAGCACCTGCGTCTTCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTTCCCGCGAAGGGCTGCACAGCAGCCGCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGcc < 6:38829/148‑1 (MQ=255) ccAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGa < 5:5399/148‑1 (MQ=255) ccAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGa < 5:294320/148‑1 (MQ=255) ccAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGAc < 1:350507/149‑1 (MQ=255) ccAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGGTTACCGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGa < 6:257480/148‑1 (MQ=255) cAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATccc > 6:83440/1‑119 (MQ=255) aGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACt > 7:320148/1‑148 (MQ=255) cATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTGTGCAGcccttcgc < 2:352849/102‑6 (MQ=37) cATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCTGTGCAGcccttcgc > 1:352849/1‑97 (MQ=37) aTCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAg < 6:32145/149‑1 (MQ=255) tCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAgg < 2:271953/149‑1 (MQ=255) tCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAgg < 5:270000/149‑1 (MQ=255) tCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGAATGAGTCAgg > 8:67018/1‑149 (MQ=255) aggagCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCg > 1:128689/1‑149 (MQ=255) ggagCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGaa > 7:12204/1‑124 (MQ=255) ggagCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGaa < 8:12204/124‑1 (MQ=255) ggagCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGAATGAGTCAGGGCGt < 7:274194/149‑1 (MQ=255) agCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGttt < 2:319904/149‑1 (MQ=255) agCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGAATGAGTCAGGGCGtga < 7:67018/149‑3 (MQ=255) gCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGtttt > 6:222742/1‑149 (MQ=255) cgcCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTAt < 5:128540/147‑1 (MQ=255) catcatGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTa > 3:235799/1‑149 (MQ=255) tcatGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTAtt < 8:320148/149‑1 (MQ=255) atGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTgg > 5:165909/1‑149 (MQ=255) ggTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCAc > 6:72326/1‑149 (MQ=255) aCTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTAc > 8:291576/1‑149 (MQ=255) cTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTAc > 6:195783/1‑148 (MQ=255) gggCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGAt < 6:63793/148‑1 (MQ=255) gggTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCa > 2:317955/1‑149 (MQ=255) ggTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGATTCACGCCCTGACTCATTCAGCGCGTTTTGATATGCGTATTGGCCAAGGCTACGAGGTGCAc > 8:331874/1‑149 (MQ=38) aCGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGAt < 6:140390/137‑1 (MQ=255) aCGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGAt > 5:140390/1‑137 (MQ=255) aCGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTc > 6:250835/1‑149 (MQ=255) gCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGtttt < 1:22965/108‑1 (MQ=255) gCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGtttt > 2:22965/1‑108 (MQ=255) cctcctGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGc < 2:128689/149‑1 (MQ=255) ctcctGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCtt > 3:336403/1‑109 (MQ=255) ctcctGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCtt < 4:336403/109‑1 (MQ=255) ctactGTTGGATCGTGAGTTCCCGCGAAGGGCTGCACAGCAGACCCAATCCCACAAATCGCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGc < 5:186078/145‑1 (MQ=255) tcctGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACg < 3:148255/124‑1 (MQ=255) tcctGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACg > 4:148255/1‑124 (MQ=255) aGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGAttt < 7:291576/149‑1 (MQ=255) aGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGAttt > 4:55171/1‑149 (MQ=255) gCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTc < 1:233303/149‑1 (MQ=255) gCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTa < 1:317955/149‑1 (MQ=255) ccGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTgg < 6:175520/149‑1 (MQ=255) ccGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTgg < 5:222742/149‑1 (MQ=255) ggggCTGCTGTGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTGGGCgggg > 7:172668/2‑149 (MQ=255) aGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTGGGCgggg < 5:72326/149‑1 (MQ=255) aGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTGGGCgggg > 8:276658/1‑149 (MQ=255) gggCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTGGGCGGGGt < 5:195783/149‑1 (MQ=255) gCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTGGGCGGGGTGc < 3:55171/149‑1 (MQ=255) gCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCCTTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTGGGCGGGGTGCGTa < 7:257857/149‑1 (MQ=255) | CAATGACCCTGCGTATGCAGCCAGGCTATGACCATAGCTACTACTTCATTGCCAGCTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCGTTTCTGCGACGGTGATTTCATTACCCTGGGCGGGGTGCGTA > NC_002947/1814394‑1814685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |