| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 197,632 | T→C | 17.0% | T1046T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 197,632 | 0 | T | C | 17.0% | 203.6 / 35.1 | 100 | T1046T (ACT→ACC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base T (42/41); new base C (6/11); total (48/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.03e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGCGGCGT > NC_002947/197485‑197778 | cTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTg > 5:185770/1‑149 (MQ=38) tACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGACAAACCATTACCGTTGAAGCCGGCAAGACACAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACCCTTCGAATGt > 6:45344/1‑149 (MQ=11) cacCTTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCa < 5:384339/149‑1 (MQ=255) gTGATCCTGAGCAATCCTTCCCAGACGCAGGTAACCTTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGt < 3:191239/149‑1 (MQ=255) tGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGt > 2:104783/1‑148 (MQ=39) tGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTc < 4:327256/149‑1 (MQ=39) gATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCa < 8:348563/149‑1 (MQ=21) tCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCAc > 5:2333/1‑148 (MQ=38) cTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAt > 6:340956/1‑149 (MQ=17) tGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATc > 8:222945/1‑149 (MQ=17) aGCAATCCTGCCCAGACGCCTGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATc < 4:206728/147‑1 (MQ=17) aGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATc < 1:104783/147‑1 (MQ=37) aGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCga < 4:372022/149‑1 (MQ=37) aGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATc < 3:16244/147‑1 (MQ=17) gCATTCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAATCCATTACGGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGATTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCga < 5:111826/148‑1 (MQ=11) gCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCgag < 6:334882/149‑1 (MQ=17) cAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCgaga < 1:331881/149‑1 (MQ=17) aaTCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGAAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGaa > 7:71319/1‑149 (MQ=37) aTCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAAc < 7:7265/149‑1 (MQ=37) tCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACg > 7:223494/1‑149 (MQ=17) tCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACg < 7:222945/149‑1 (MQ=17) tCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACg > 3:146841/1‑149 (MQ=17) tCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCATCAGCGTCACCATCGAGAACg > 3:281111/1‑149 (MQ=17) ccAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAAACCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAAAGGTTCGACTGTCAGCGTCACCATCGAGAACGCAACAg > 1:270055/1‑149 (MQ=11) ccAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCACGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAg > 7:191641/1‑149 (MQ=37) cAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAgg > 3:48931/1‑149 (MQ=255) cAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCAAAACCGTTGAAGCCGGCAAGACCCCGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACCTATACAACAACGGTTCGACTGTCAGCGTCCACATAGAGAACGCCACAgg > 5:36701/1‑149 (MQ=11) aGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGc < 1:222578/149‑1 (MQ=37) aGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGc > 2:33438/1‑149 (MQ=37) aGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGc > 1:377836/1‑149 (MQ=17) gACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCg < 6:89064/149‑1 (MQ=37) gACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGGCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCg < 7:92194/149‑1 (MQ=17) aCGCCGGTGACCGTGATCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCgg < 1:219756/149‑1 (MQ=11) cGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGt < 8:235358/149‑1 (MQ=255) ccGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTaa < 2:199705/149‑1 (MQ=17) ctgTAACCGGGTCCCTGTCCAACGTCCATACAATTACCGTTGAAGCCGGAAAGACCCATGGCAGCTTCGATTTCCAG‑ACCCCGGCGAATGAAGTCTACAACATCGGTTCGACTGTCAGCGTGACCATCGATTACGCCACAGGCGGTAAt < 6:36701/147‑1 (MQ=11) cGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATAGAGAACGCCACAGGCGGTAAt > 5:373675/1‑149 (MQ=37) ggTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAAtt > 6:56694/1‑149 (MQ=255) ggTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAACACAAAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACTTATACAACAACGGTGCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAAtt > 7:140874/1‑149 (MQ=11) tAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTc < 4:222899/149‑1 (MQ=35) tAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTc < 6:133918/149‑1 (MQ=14) cccGCGACCCCTTCCACCGGCCAAACCAATACCGTAGAACCCGGCAACACCCACGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGCCAGCGTCACCATCGAGAACCCCACAGGCGGTAATTTCGa < 8:71319/148‑1 (MQ=11) aCCGTGACCCTGTCCAAGGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 6:80993/149‑1 (MQ=255) aCCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 7:250526/149‑1 (MQ=34) aCCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 8:247856/149‑1 (MQ=34) cGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAg > 8:22233/1‑148 (MQ=32) gTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGc > 7:30206/1‑148 (MQ=32) gACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAAc > 4:97961/1‑149 (MQ=32) aCCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAAc < 8:124572/148‑1 (MQ=12) aCCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACt > 7:212789/1‑149 (MQ=12) cccTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGTACCCCGGCAAATGACGTGTACAACAACGGTACCACTGTCAGCGTCACCAGCGAGAACGCCACAGCGGGTAATTTCGACCAACt > 1:302329/1‑149 (MQ=11) ccTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGTGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGa > 2:273633/1‑149 (MQ=255) ccTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCAACATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGa > 1:13684/1‑149 (MQ=255) ccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGa > 5:258077/1‑149 (MQ=32) gTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAg < 3:21895/125‑1 (MQ=32) gTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAg > 4:21895/1‑125 (MQ=32) cAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCg > 4:176120/1‑148 (MQ=32) aaCGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTc < 3:226561/132‑1 (MQ=12) aaCGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTc > 4:226561/1‑132 (MQ=12) aaCGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGaa > 8:132638/1‑149 (MQ=12) aCGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAAc < 8:212789/149‑1 (MQ=12) ggCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAAAGCCACAGGCGGTAATTTCGATCAACTGACCCCGAAccc < 6:185770/149‑1 (MQ=21) ccAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTAACCATCGAGCAAGCCACAGGCGGTAATTTCGAGCAACTGAccccgaccccga > 6:117285/1‑149 (MQ=255) cAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACCACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGAc > 7:315101/1‑149 (MQ=255) cAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACt < 7:156246/87‑1 (MQ=31) cAAACCATTACCGTTGAAGCCGGCAAGACCCAGGCCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACt > 8:156246/1‑87 (MQ=14) aaaCGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGAcc > 8:48717/1‑148 (MQ=255) aaaCCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACg > 7:320188/1‑149 (MQ=35) aTTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGc > 1:243343/1‑149 (MQ=37) ttACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGc < 6:34220/103‑1 (MQ=32) gccGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTc < 1:358795/147‑1 (MQ=37) ttGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGATCGACTGTCAGCGTCACCATAGAGAACGCCACAGGCGGTAATTTCGAGCAACTGCCCCCGAACCCGACCCCGGCTCAGAc > 2:238244/1‑148 (MQ=11) gAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCa < 2:246154/148‑1 (MQ=12) aaGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCAc < 8:320188/148‑1 (MQ=37) aaGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACg < 5:45344/149‑1 (MQ=37) aGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGa < 7:22233/149‑1 (MQ=37) aGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACg < 1:329242/148‑1 (MQ=12) ccGGCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGAt > 2:170352/1‑148 (MQ=12) ggCAAAACCCAGGGCAGCGTCGACTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACCCCGGCTCAGACCACGATCaa < 8:315101/149‑2 (MQ=9) gCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGAc < 1:211835/139‑1 (MQ=37) gCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGAc > 2:211835/1‑139 (MQ=37) ccAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGACCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCCCGATCACCGACTCgg > 3:231406/1‑149 (MQ=255) ccAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCgg > 8:284704/1‑149 (MQ=39) cAGGGCAGCGTCGACTTCCAG‑ACCCCGTCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAg < 8:293222/99‑1 (MQ=16) aGCTTCGATATCCAG‑ACCCCCGCGAATGACGTCTACAACAACGCTTCGACTCTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGacac < 8:191641/149‑1 (MQ=14) gTCGATTTCCAG‑ACCCCGACGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACACCGAACCCGACGCCGGCTCCGACCACGATCACCGACTCGGTCGAccccac > 4:10660/1‑149 (MQ=255) aTTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCca < 4:372358/69‑1 (MQ=35) aTTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCca > 3:372358/1‑69 (MQ=35) cAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTc < 2:251398/78‑1 (MQ=34) cAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTc > 1:251398/1‑78 (MQ=34) aG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGAcc < 5:64887/149‑1 (MQ=255) aCGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGcc > 6:205329/1‑148 (MQ=255) cGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCaa < 6:2333/149‑1 (MQ=255) cGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCaa < 7:284704/149‑1 (MQ=255) cTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCAAGCg > 3:143308/1‑149 (MQ=255) caacaaCGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCTGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACAGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCAAGCGt < 5:117285/147‑1 (MQ=255) aacaacGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCAAGCGTGAc < 1:228532/149‑1 (MQ=255) caacGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGTAAATTTCGAGCAACTGACCCCGAACCCGACCCCGGATCAGACCACGATCACCGACTAGGTCGACACCACTACTCCGACACTGACCGCCTAGCCAAGCCTGAcc > 3:304190/1‑148 (MQ=17) acGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTTAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCAAGCGTGACCGaa < 3:97961/149‑1 (MQ=255) aCTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGCGGCGt < 6:373675/149‑1 (MQ=255) | CTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAG‑ACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCACCGACTCGGTCGACACCACTACTGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGCGGCGT > NC_002947/197485‑197778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |