| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 239,949 | A→G | 6.7% | T82A (ACC→GCC) | PP_0188 → | uroporphyrin‑III C‑methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 239,949 | 0 | A | G | 6.7% | 256.6 / 7.0 | 89 | T82A (ACC→GCC) | PP_0188 | uroporphyrin‑III C‑methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (42/41); new base G (4/2); total (46/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.22e-01 | |||||||||||
CCCACCTGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGGCAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGG > NC_002947/239801‑240093 | cccaccTGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGa > 7:155864/1‑149 (MQ=255) ccaccTGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGAc > 1:133254/1‑149 (MQ=255) ccaccTGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGAc < 6:105019/149‑1 (MQ=255) caccTGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGAcc < 5:89893/149‑1 (MQ=255) ccTGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGAcc > 4:82310/1‑147 (MQ=255) cTGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAg > 1:110118/1‑149 (MQ=255) tGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAg‑c > 6:265056/1‑149 (MQ=255) ccAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAg‑cgc < 2:133254/149‑1 (MQ=255) ccAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGGGCGGCCGGGGTGGCGGTAGGTGGCTGGGGGGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAg‑cgc > 2:237885/1‑149 (MQ=255) aaGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAg‑cgcgc > 1:62979/1‑149 (MQ=255) aaGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAg‑cgcgc < 3:82310/149‑1 (MQ=255) aaGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAg‑cgcgc > 2:265074/1‑149 (MQ=255) aaGCGCTCCGGCAGGGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGGGTCAg‑cgcct < 3:276879/149‑3 (MQ=255) cTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAgg < 3:185045/149‑1 (MQ=255) tCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGgc < 2:244085/149‑1 (MQ=255) tCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGgc > 5:331623/1‑149 (MQ=255) cGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGGCAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGgcgc > 7:28859/1‑149 (MQ=255) aGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTgca < 8:30907/149‑1 (MQ=255) aGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTgca < 2:110118/149‑1 (MQ=255) aGTGGCCTGGCAGCGCTGGCCTTGCTGCTGGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTg > 1:28222/1‑147 (MQ=255) gCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGt < 2:62979/147‑1 (MQ=255) gCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTg < 6:331623/148‑1 (MQ=255) cgcTGGCCTTGCTGCTTGGTGCGGCCGCGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAAcag > 4:222615/1‑149 (MQ=255) cTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCTAGCACATCGAGGCGCTGACACAG‑CGCGCCGAGGCGCTGCAGCAACGTGAAcagca > 8:335813/1‑149 (MQ=255) cTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAGCCGCGCCGAGGCGCTGCAGCAACGTGAAcagc < 1:40174/149‑1 (MQ=255) gCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGAt < 5:265056/149‑1 (MQ=255) cTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGAt > 1:161613/1‑147 (MQ=255) cTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCa > 3:211272/1‑149 (MQ=255) gctTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTgcg > 7:43524/1‑148 (MQ=255) ctTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTAACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTgcg < 2:155884/147‑1 (MQ=255) gTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACt < 6:318161/148‑1 (MQ=255) gTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTg < 1:237885/149‑1 (MQ=255) cGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGc < 2:28222/148‑1 (MQ=255) cGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGc > 3:162248/1‑148 (MQ=255) cGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGc < 3:116559/148‑1 (MQ=255) cGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGc < 8:155864/148‑1 (MQ=255) gTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAgccgc > 8:221268/1‑149 (MQ=255) gTAGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAgccgc < 4:162248/149‑1 (MQ=255) aGGTGGCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAgccgc > 1:106900/1‑147 (MQ=255) ggCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACAACGAGGCGCAGACCAAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGa > 8:355246/1‑149 (MQ=255) gCTGGGGTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAg < 4:211272/149‑1 (MQ=255) ggggTGTCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTa < 4:56459/149‑1 (MQ=255) gtgtCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTagaa < 8:69507/149‑1 (MQ=255) gtCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGcc < 1:68598/128‑1 (MQ=255) gtCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGcc > 2:68598/1‑128 (MQ=255) tCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTgcagca > 4:163334/1‑88 (MQ=255) tCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTgcagca < 3:163334/88‑1 (MQ=255) tCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAAcag > 8:287515/1‑98 (MQ=255) tCTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAAcag < 7:287515/98‑1 (MQ=255) cTGACAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGAcc > 6:90683/1‑149 (MQ=255) tgacAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGAccg > 3:356091/4‑149 (MQ=255) ggTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGc > 2:9315/1‑149 (MQ=255) gTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCa > 1:250588/1‑108 (MQ=255) gTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCa < 2:250588/108‑1 (MQ=255) tCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTgg > 5:325951/1‑149 (MQ=255) tCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTgg < 2:161613/149‑1 (MQ=255) aaCTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCTCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCATCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTgtt < 8:28859/148‑3 (MQ=255) aaCTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTa < 8:317487/149‑1 (MQ=255) cAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCa < 4:1660/149‑1 (MQ=255) gggCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGt > 3:102639/1‑149 (MQ=255) aGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCa < 5:90683/149‑1 (MQ=255) gTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAg > 6:63390/1‑149 (MQ=255) tGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAgg < 7:221268/149‑1 (MQ=255) aGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAggg < 4:102639/148‑1 (MQ=255) aGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGc < 6:325951/149‑1 (MQ=255) gTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGc < 8:302819/148‑1 (MQ=255) ttCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGa > 8:145287/1‑149 (MQ=255) ttCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGa > 7:280308/1‑149 (MQ=255) ttCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGGCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGa < 3:222615/149‑1 (MQ=255) gcgctgggTCAGCGCCTCGATGTGCTGGCCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGAc > 8:310179/6‑147 (MQ=255) gctgggTCAGCGCCTCGATGTGCTGGCCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACcag > 6:194617/4‑148 (MQ=255) ccAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCa < 6:72030/91‑1 (MQ=255) ccAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCa > 5:72030/1‑91 (MQ=255) ccAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTa < 6:53687/127‑1 (MQ=255) ccAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTa > 5:53687/1‑127 (MQ=255) tgggTCAGCGCCTCGATGTGCTGGCCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTGGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACcagcag > 6:233283/2‑149 (MQ=255) gCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTca > 2:160793/1‑149 (MQ=255) cacaTCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTcag > 7:328610/1‑149 (MQ=255) ctCGATGTGCTGGCCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTcagc > 7:34613/2‑147 (MQ=255) aTCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTcagc > 7:260774/1‑147 (MQ=255) aGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGAcc > 3:277654/1‑129 (MQ=255) aGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGAcc < 4:277654/129‑1 (MQ=255) aGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAgcgc > 3:28956/1‑149 (MQ=255) gcgcTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCt < 2:106900/149‑1 (MQ=255) tgcTGGCCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCt < 5:194617/147‑1 (MQ=255) gcTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGTCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGc < 2:65024/108‑1 (MQ=255) gcTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTg > 5:182946/1‑148 (MQ=255) gcTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTg > 5:188327/1‑148 (MQ=255) gcTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGACGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGc > 1:65024/1‑108 (MQ=255) cTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTgg > 8:101073/1‑148 (MQ=255) | CCCACCTGCCAAGCGCTCCGGCAGTGGCCTGGCAGCGCTGGCCTTGCTGCTTGGTGCGGCCGGGGTGGCGGTAGGTGGCTGGGGTGTCTGGCAGGTGCGTCAACTGCAGGGCAGTGAGTTCAACCAGGGCCAGCACATCGAGGCGCTGACCCAG‑CGCGCCGAGGCGCTGCAGCAACGTGAACAGCAGATCAGTGCGCAACTGGCCAGTCTGCCAGCCGCCAGCGAGCTAGAAGACCGCCGGCGTTTGGTAGCCCAGTTGCAGGGCGACCAGCAGCGTCTCAGCCAGCGCCTGG > NC_002947/239801‑240093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |