| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,372,122 | G→A | 7.6% | intergenic (‑50/‑69) | csoR ← / → PP_2970 | copper utilization transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,372,122 | 0 | G | A | 7.6% | 330.2 / 11.6 | 118 | intergenic (‑50/‑69) | csoR/PP_2970 | copper utilization transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (54/54); new base A (7/2); total (61/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
CTGACGATGCTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCT > NC_002947/3371978‑3372269 | cTGACGATGCTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTggggg < 5:132975/148‑1 (MQ=255)cTGACGATGCTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTggggg < 8:119901/148‑1 (MQ=255) tGACGATGCTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTgggggg > 5:364428/1‑148 (MQ=255) gACGATGCTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGa > 7:12936/1‑149 (MQ=255) gACGATGCTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGa > 1:93738/1‑149 (MQ=255) aCGATGCTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGat < 3:84387/149‑1 (MQ=255) ctgcGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGt < 1:186038/148‑1 (MQ=255) tgcGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTc > 6:202582/1‑148 (MQ=255) tgcGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCATATCCCCCCCAGGGGGataggatgc > 3:180901/1‑143 (MQ=255) cgcAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCaa < 6:152936/148‑1 (MQ=255) cgcAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCATATCCCCCCCAGGGGGataggatgc < 4:180901/147‑7 (MQ=255) aGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGCATACGGTCAAAcc > 3:273060/1‑148 (MQ=255) ggTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCaa < 7:252112/149‑1 (MQ=255) ccTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGa < 7:199561/129‑1 (MQ=255) ccTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGa > 8:199561/1‑129 (MQ=255) cGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTc < 3:48643/149‑1 (MQ=255) gCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGaac < 8:318935/149‑1 (MQ=255) cAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTGATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGaacaac < 8:90806/148‑1 (MQ=255) ccTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCCCAGGGGGataggat < 4:44988/119‑5 (MQ=255) cTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGTATATGGTCAAACCAACTACCCCTTCAGAACAACCATcc < 5:384464/149‑1 (MQ=255) atgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGc > 3:189092/1‑145 (MQ=255) atgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGc < 4:189092/145‑1 (MQ=255) atgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTa < 2:93738/148‑1 (MQ=255) tgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAgg < 1:199382/149‑1 (MQ=255) tgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAgg > 3:279098/1‑149 (MQ=255) atatCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTGATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGTGGGGGATATGGTCAAACCAACTACCCCTTGAGATCAACCATCGGCTTAgtc < 4:165531/148‑3 (MQ=255) atatCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGc < 3:93396/148‑1 (MQ=255) tatCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCAt < 3:114914/149‑1 (MQ=255) tCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCAACCGCTTAGGCATc > 2:292426/1‑148 (MQ=255) gCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCaa > 5:326270/1‑148 (MQ=255) aTGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAg > 7:322184/1‑148 (MQ=255) tGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAg < 6:74387/147‑1 (MQ=255) tGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGaa < 6:364428/149‑1 (MQ=255) tGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGa < 4:279098/148‑1 (MQ=255) tcTTTGGTGCTGATGGCCGTGTTCGTGATCTCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCTCATCATATCCCCCTGGGGTGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAATaaa < 5:372958/147‑1 (MQ=255) tttGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAacac > 3:333393/1‑149 (MQ=255) ttGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAacac > 4:276443/1‑148 (MQ=255) tGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACg < 3:360995/148‑1 (MQ=255) ggTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGa < 1:343918/148‑1 (MQ=255) gCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCGCGCATCCTATCCCACTGGGCGGGATATGGTCAAACCAACTACCCCATCAGAACAACCATCCGCTTAGGCATCAAAAGAAACAGGACA‑Tg > 4:1211/1‑149 (MQ=255) ggCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAg > 1:243328/1‑148 (MQ=255) cGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCAATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCACAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAAc < 2:322594/149‑1 (MQ=255) cGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCaa > 5:13689/1‑83 (MQ=255) cGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCaa < 6:13689/83‑1 (MQ=255) gTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TCCTCAGCAACCCCAt > 7:277077/1‑147 (MQ=255) tgttCGGTCATGCCTTGAGTCTCATGCATCGATTAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCAt < 4:320596/143‑1 (MQ=255) tGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCATATCCCCCTGGGGTGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCAATCAg > 7:275070/1‑149 (MQ=255) aTCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATAAGCa > 7:307557/1‑149 (MQ=255) gCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTa < 4:333393/149‑1 (MQ=255) tCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAg > 7:203463/1‑149 (MQ=255) tCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAg > 4:229537/1‑149 (MQ=255) aTGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACAAACTACCCCTTCAGAACAACCATCCGCGTAGGAATCAAAAGAAACAAGACA‑TCCTCAGCACCCCCAGAAGCACTAAGGt > 3:25754/1‑149 (MQ=255) aTGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATACGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAg < 4:273060/147‑1 (MQ=255) cTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCACCCCCATCAGCACTAAGGTGAtt > 4:40053/1‑149 (MQ=255) ttGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGAttt > 3:297390/1‑149 (MQ=255) cgTCTCATTCATCGATGAATTACTCTCGCATCCTATCCCCCTGGGGGGTATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGAttttt < 8:307557/147‑1 (MQ=255) tctcATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGcc > 6:215297/1‑149 (MQ=255) tcATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCt > 8:78377/1‑149 (MQ=255) aaggCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGccc < 3:356160/144‑1 (MQ=255) aTGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCTGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCtt < 6:366217/148‑1 (MQ=255) aTGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACg > 7:10579/1‑104 (MQ=255) aTGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACg < 8:10579/104‑1 (MQ=255) aTCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGctct < 3:295019/149‑1 (MQ=255) tCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGt < 6:352237/45‑1 (MQ=255) tCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGt > 5:352237/1‑45 (MQ=255) tCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTg < 2:243328/149‑1 (MQ=255) tCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTCATTTTTGCCCTTGCTCTg > 4:30332/1‑149 (MQ=255) gATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCGCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 1:52140/1‑149 (MQ=255) gATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTg < 3:295031/147‑1 (MQ=255) gATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTg > 4:295031/1‑147 (MQ=255) gATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 7:63633/1‑149 (MQ=255) aTGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGa > 1:276045/1‑90 (MQ=255) aTGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGa < 2:276045/90‑1 (MQ=255) aTGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCAc < 7:321250/121‑1 (MQ=255) aTGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGcc < 5:202582/149‑1 (MQ=255) aTGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTAAGGCATCAAAAGAAACACGACA‑TCCACAGCACCCCCATCAGCAc > 8:321250/1‑121 (MQ=255) ttACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCtt < 3:40053/149‑1 (MQ=255) ttACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCtt > 4:56508/1‑149 (MQ=255) aCGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGa > 5:206304/1‑149 (MQ=255) gCTCGCATCCTATCCCCCAGGGGCGGATATGGTCAAACCAACTACCCCTTCATATCAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCAGCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATa < 8:9435/149‑1 (MQ=255) gCTAGCATTCAATCACCCTTGGGGGGTTATTTTCAAACCAACTACCCCTTAATAACAAACATTCGCTTACGCATCAAAAGAAACACGACATTGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGAt < 1:292426/149‑1 (MQ=255) tCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGc > 4:318725/1‑149 (MQ=255) accatATCCCCCCCAGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCACCCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTgg > 5:51538/5‑149 (MQ=255) aTCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCTATCAAGATGGccaga < 4:327667/149‑4 (MQ=255) ccatATCCCCCCCAGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTggg > 2:154074/4‑149 (MQ=255) catATCCCCCCCAGGGGGATAGGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGc > 1:176236/3‑149 (MQ=255) cTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGcc < 7:78377/149‑1 (MQ=255) aTCCCCCCCAGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGCCA‑TGCTCAGCAACCCCAGCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg > 2:371031/1‑149 (MQ=255) tCCCCCTGGTGGGGATATGGTCAAAACAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCggg < 8:275070/149‑1 (MQ=255) tCCCCCTGGGGGGGATATGGTCAAAGCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACAAGACA‑TGCTCAGCAAACCAATCAGCAATAAGGTGATTTTTGCCCTTGATCTGGCCATCTTGATAGACTGGTCCggg > 6:57968/1‑149 (MQ=255) tCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCggg < 8:12936/149‑1 (MQ=255) tCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCg < 5:619/147‑1 (MQ=255) ccccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCt < 2:90054/130‑1 (MQ=255) ccccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGc < 5:285756/148‑1 (MQ=255) cccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGaa < 2:336699/67‑1 (MQ=255) cccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGaa > 1:336699/1‑67 (MQ=255) cccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCTCTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCATGGGCCGGGca > 8:349987/1‑148 (MQ=255) cccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCGATCTTGATAGCCTGGGCCGGGcac > 3:64152/1‑149 (MQ=255) cccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGca > 3:189590/1‑148 (MQ=255) cccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGca > 2:322812/1‑148 (MQ=255) | CTGACGATGCTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACA‑TGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCT > NC_002947/3371978‑3372269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |