| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,424,890 | C→G | 12.8% | intergenic (+478/‑34) | PP_3039 → / → PP_3040 | hypothetical protein/holin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,424,890 | 0 | C | G | 12.8% | 194.1 / 19.3 | 77 | intergenic (+478/‑34) | PP_3039/PP_3040 | hypothetical protein/holin |
| Reads supporting (aligned to +/- strand): ref base C (32/35); new base G (3/7); total (35/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.94e-01 | |||||||||||
AACAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGT > NC_002947/3424746‑3425033 | aaCAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTgg > 6:285515/1‑149 (MQ=255)aaCAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTgg > 4:60059/1‑149 (MQ=255) aCAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCAACACCGGAATCCAGCTTTAAAATGTACACATATTCGAGAAGAGCGCGCGCACAAAGCCGCCCGCAAAACACTCAAAACCCCGGCCGTg > 1:108214/1‑149 (MQ=255) aCAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCCCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGgc > 7:161658/1‑149 (MQ=255) aTTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCggg > 4:153964/1‑149 (MQ=255) aTTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGAACAAAGCGGCCCGCCAAACACTGAAAACCCCCGCCCTGGCGCCggg > 7:325533/1‑149 (MQ=255) ttCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGT‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCgggg > 6:363826/1‑149 (MQ=255) ttCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCgggg < 7:46253/149‑1 (MQ=255) ccccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGt < 7:325710/148‑1 (MQ=255) cccGGACGTTTAACACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGttt < 2:347413/149‑1 (MQ=255) cagggACGTTTAACACTTCTTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttt < 4:31631/146‑1 (MQ=255) ccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGtttt > 5:188431/1‑149 (MQ=255) cGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttttt < 1:199080/149‑1 (MQ=255) ggACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTGGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGttttca < 1:82402/149‑3 (MQ=255) ggACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTg > 7:282624/1‑149 (MQ=255) gACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGttttcag < 3:153964/149‑4 (MQ=255) gACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGc < 5:322469/149‑1 (MQ=255) caCGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTTTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCCGCGCCAGGGCCGGGGttttcag < 7:56008/148‑4 (MQ=255) aCGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGttttcagt < 6:300244/149‑5 (MQ=255) tACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTg < 2:352104/148‑1 (MQ=255) ccACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAATGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTggg < 2:73217/148‑1 (MQ=255) ccACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTggg < 3:60059/148‑1 (MQ=255) cACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTggggg < 7:190540/149‑1 (MQ=255) cTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 6:157387/144‑1 (MQ=255) cTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg > 5:157387/1‑144 (MQ=255) ttATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGAt > 8:97371/1‑148 (MQ=255) ttGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGa > 6:30448/1‑149 (MQ=255) gCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt < 6:124432/148‑1 (MQ=255) cGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGaa < 8:161658/149‑1 (MQ=255) cgttAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGag < 3:176466/147‑1 (MQ=255) aTTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCgcg > 2:159958/1‑146 (MQ=255) aTTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGag > 8:180340/1‑148 (MQ=255) ttAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGagca < 5:30448/149‑1 (MQ=255) aCTCGCTTACTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAg > 5:260397/1‑149 (MQ=255) tCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCg > 2:326834/1‑149 (MQ=255) gCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGt < 3:349385/148‑1 (MQ=255) gCTTGCTG‑‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGc > 1:290924/1‑134 (MQ=255) gCTTGCTG‑‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGc < 2:290924/134‑1 (MQ=255) cTTACTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTa < 6:260397/149‑1 (MQ=255) gctgc‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGCGCAGCAAGCGTTAGtt > 2:24149/1‑149 (MQ=255) ctgc‑‑CACCGGAATCTAACAGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGtt < 8:251576/148‑1 (MQ=255) c‑‑cACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCg > 8:197848/1‑128 (MQ=255) c‑‑cACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCg < 7:197848/128‑1 (MQ=255) c‑‑cACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTg < 6:188431/146‑1 (MQ=255) ggAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGcc > 1:140657/1‑148 (MQ=255) gAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCaa > 1:223306/1‑149 (MQ=255) aCCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggt > 4:132270/1‑149 (MQ=255) ccTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggtt < 7:97371/149‑1 (MQ=255) cTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttg < 5:285515/149‑1 (MQ=255) tAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAGGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGAt > 3:285836/1‑133 (MQ=255) tAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAGGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGAt < 4:285836/133‑1 (MQ=255) tAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggt < 1:24149/148‑1 (MQ=255) aaaGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATc < 2:223306/149‑1 (MQ=255) aaaGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCATGGCGCCGGGGTTTTTGCCTTT‑GGTGATTCGATTAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCt < 8:177769/149‑1 (MQ=255) aaGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCt < 1:326834/149‑1 (MQ=255) aCCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTgaga > 3:61696/1‑124 (MQ=255) aCCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTgaga < 4:61696/124‑1 (MQ=255) cATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTc < 5:60003/144‑1 (MQ=255) aTCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATc > 5:38141/1‑140 (MQ=255) aTCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATc < 6:38141/140‑1 (MQ=255) ttCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAAACCCGGCCCAGGCGCCGGGGGTTTTGGCGTTGGGGGTTTGGATGAACAGCGAGCCGCAAGGGTTATTTGAGATGCCAATCTGGTTGGTGTTTTTCCTGTCCCTg > 2:353597/1‑149 (MQ=255) tCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACCCTGAAAACCCCGGCCCTGGGGCCGGGGGTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGGTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCGGTCCCTgg > 7:299361/1‑149 (MQ=255) cGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTg < 7:59379/147‑1 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTcggcgg > 7:269475/1‑149 (MQ=255) tGCGGGCTCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCggg < 3:204659/149‑1 (MQ=255) tGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCggg < 7:180340/149‑1 (MQ=255) gcgcACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTc < 1:181936/149‑1 (MQ=255) gCCCGCCAAAGACTGAAACCCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGAtgtg < 8:325533/149‑1 (MQ=255) cccGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTgg > 6:123089/1‑149 (MQ=255) cAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCTGGGTGTCAGGCGAGATGTGGCGGGc > 4:253087/1‑149 (MQ=255) tGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATg > 1:241835/1‑149 (MQ=255) caaaaaCCCCGGCGCCAGGGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATg > 8:225456/3‑149 (MQ=255) gAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATgg > 5:342956/1‑149 (MQ=255) aaaaCCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATg < 2:241835/147‑1 (MQ=255) ccccGGCGCCAGGGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTACCTGGTCGGAGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGc > 7:336133/1‑149 (MQ=255) ccccGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGc < 8:282624/149‑1 (MQ=255) cccGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTCAGATGCCATTCTGGTTGGTTAACTTCCTGTCCCTGGTCGGCGGGTTGTCAGGCGAGATGTGGCGGGCCGACATGGACGGCg > 1:59051/1‑149 (MQ=255) ccctcccTGTGGCCGTGGTTTTTGCCTTTGGGGGAATCGATGAACAGCGAGCATCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTTGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGGCGACATGGCCGGCGt < 6:257988/145‑1 (MQ=255) | AACAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGC‑‑CACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGT > NC_002947/3424746‑3425033 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |