| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,746,369 | T→C | 6.5% | L552P (CTG→CCG) | paoC → | aromatic aldehyde dehydrogenase molybdopterin‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,746,369 | 0 | T | C | 6.5% | 226.0 / 4.4 | 77 | L552P (CTG→CCG) | paoC | aromatic aldehyde dehydrogenase molybdopterin‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base T (33/39); new base C (3/2); total (36/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01 | |||||||||||
GGCGGATCGTTTACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTCGCGGAAGTCCAC > NC_002947/3746221‑3746517 | ggCGGATCGTTTACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCt < 2:4582/149‑1 (MQ=255) ggATCGTTTACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGTCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCa > 1:334013/1‑149 (MQ=255) gTTTACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCAcgcg < 6:189367/148‑1 (MQ=255) gTTTACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCgg < 5:115989/149‑1 (MQ=255) gTTTACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCgg < 2:107105/149‑1 (MQ=255) tttACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCggg > 3:353658/1‑149 (MQ=255) tACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCggg > 2:72065/1‑147 (MQ=255) aCGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCa < 6:96608/148‑1 (MQ=255) cGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCATGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCCCGCGTGCAgg < 5:185380/149‑2 (MQ=255) ggTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCt > 8:219889/1‑135 (MQ=255) ggTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCt < 7:219889/135‑1 (MQ=255) ggTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAACTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGc > 4:300519/1‑148 (MQ=255) tcgtcgGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTGCCCGCGTGCAGGTAGCCATCg < 4:369085/149‑1 (MQ=255) gtcggtcgGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGc < 1:72065/148‑1 (MQ=255) tcggtcggTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCt > 5:71771/1‑149 (MQ=255) cggtcggtTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTg < 6:112648/149‑1 (MQ=255) ggtcggtTCGGCCGTGCGCCATGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTg < 1:254837/148‑1 (MQ=255) ggtcggtTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTgg > 1:337694/1‑149 (MQ=255) gtTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTg < 5:26209/149‑1 (MQ=255) gtTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTg > 5:55661/1‑149 (MQ=255) gCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGa > 4:224931/1‑149 (MQ=255) gCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACATGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGa < 4:247603/149‑1 (MQ=255) cGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGAca < 3:308909/149‑1 (MQ=255) tGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGAcatc < 6:49010/149‑1 (MQ=255) gcCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACatcatc < 5:310432/149‑1 (MQ=255) gcCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACatcatc < 8:199211/149‑1 (MQ=255) ccAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCAcgc < 1:374332/114‑1 (MQ=255) ccAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCAcgc > 2:374332/1‑114 (MQ=255) cAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGc < 1:12234/149‑1 (MQ=255) aGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGc > 4:5265/1‑148 (MQ=255) ggCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCa < 3:64299/149‑1 (MQ=255) gCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAg > 5:283081/1‑149 (MQ=255) cTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAgcg < 7:226821/149‑1 (MQ=255) tGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAgcgc > 1:125092/1‑149 (MQ=255) ccAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGccc > 5:102923/1‑149 (MQ=255) cAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGTCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGCCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACAACAACGCCAGCGcccc > 5:284322/1‑149 (MQ=255) cGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGt < 2:334013/147‑1 (MQ=255) cGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGt > 7:196460/1‑147 (MQ=255) ccAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGtt < 6:306817/148‑1 (MQ=255) cAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTc > 3:145199/1‑148 (MQ=255) cAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTc > 1:263047/1‑148 (MQ=255) aaGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGaa < 6:71771/149‑1 (MQ=255) tGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCa > 3:261563/1‑148 (MQ=255) cATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGa < 5:372802/149‑1 (MQ=255) cgcAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGa < 7:326516/149‑1 (MQ=255) gcAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAg > 6:68633/1‑149 (MQ=255) gcAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAg > 2:43249/1‑149 (MQ=255) tGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGgc > 3:350639/1‑149 (MQ=255) tACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGgcgc > 6:250329/1‑149 (MQ=255) tACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGgcg < 1:43249/148‑1 (MQ=255) ccccAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGgcgc > 5:37619/1‑146 (MQ=255) cccAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGa > 2:211094/1‑149 (MQ=255) ccAAGTGGCCAGCACGGCGCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGAc < 6:284322/149‑1 (MQ=255) ccAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGAc > 8:338047/1‑149 (MQ=255) gCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCGCGGCGCCAGACGCCAAcc < 2:263047/149‑1 (MQ=255) gCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCCCCCCCGAAGGTGAGTAGGAAGTGCAAATCGACGCCGAGCCCGCCGCCAGACGCCAAcc > 8:105212/1‑149 (MQ=255) gCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCAc < 4:350639/149‑1 (MQ=255) gCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCAc > 3:11802/1‑149 (MQ=255) gCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCAc < 2:337694/149‑1 (MQ=255) gCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCGGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGaa > 2:196932/1‑94 (MQ=255) gctCAGTTTCGCCGCTGGCTCCCTGCACGCGTGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGACGGGGAGTTCGCAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTGCTCCACCGCTACCCAtt < 8:251090/147‑1 (MQ=255) gATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAAc > 1:218282/1‑128 (MQ=255) gATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAAc < 2:218282/128‑1 (MQ=255) aTCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGACAGCGCCCCCGAAGGGGAGTTCGAAGTGCAAATCGACCCCGCGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTc > 7:132983/1‑149 (MQ=255) cATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCgg > 4:282053/1‑149 (MQ=255) aTTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCgg < 3:300519/148‑1 (MQ=255) tttCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAg > 7:204189/1‑149 (MQ=255) ccGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTc < 3:282053/149‑1 (MQ=255) gATGGCTGCCCGCGTGCAGGTAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGa > 2:6261/1‑108 (MQ=38) gATGGCTGCCCGCGTGCAGGTAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGa < 1:6261/108‑1 (MQ=38) gATGGCTGCCCGCGTGCAGGTAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTcgc > 1:357160/1‑149 (MQ=255) aTGGCTGCCCGCGTGCAGGTAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGACCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTcgcg > 6:338103/1‑149 (MQ=255) aTGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTcgcg < 2:125092/149‑1 (MQ=255) tGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTCGCgg < 5:68633/149‑1 (MQ=255) gCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTCGCGGaa < 4:353658/149‑1 (MQ=255) gCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTCGCGGaa < 7:257547/149‑1 (MQ=255) gCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTCGCGGaa < 6:37619/149‑1 (MQ=255) cTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCg < 1:75728/133‑1 (MQ=255) cTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCg > 2:75728/1‑133 (MQ=255) cTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTCGCGGAAg < 7:338047/149‑1 (MQ=255) tGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTCGCGGAAGTCCAc > 7:218345/1‑149 (MQ=255) | GGCGGATCGTTTACGGTGTCGTCGGTCGGTTCGGCCGTGCGCCAGGCCTGCCAGGTACTGCGTACCAAAGTGCTGGAACATGCGCGCAGGATGTACCCCCAAGTGGCCAGCACGGCCCGGGAGCAGATCATTTTCGCCGATGGCTACCTGCACGCGGGCAGCCATCGCCTGGCCTTGGCGGACATCATCGCCAGCGCCCCCGAAGGTGAGTTCGAAGTGCAAATCGACGCCGAGCCCGGCGCCAGACGCCAACCGTTCTCCACCGCTACCCATTCGGCAGTATTCGCGGAAGTCCAC > NC_002947/3746221‑3746517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |