Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	84.3 / NA	26	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (10/16);  total (10/16)

CCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGC  >  NC_002947/6013750‑6014024                                                                                                                                        |                                                                                                                                             ccGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCCCGCCCCCGCCCCCCCGGGCCGCCCAGGGCGCGACCCCGGGGGCGGTCCGGTGGGCGCGGGCGGGGCCGCGCATGGgcgc                                                                                                                                  >  1:13688/1‑148 (MQ=255)               tGGAAGGGGGTGTGGGCAGCTTCATCGAATAACCGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑g                                                                                                                   <  8:42151/148‑1 (MQ=255)                  aaGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGtt                                                                                                                <  4:94727/148‑1 (MQ=255)                  aaGGTGGTGGGGTCAGCTGCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACCGGTGCAGCACAGGTCTCGACCGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGtt                                                                                                                <  5:191451/148‑1 (MQ=38)                  aaGGTGGTGGGGTCAGCGGCCTCGAATAACCGCGCCACCTGCTTCGCGGGCCCGCCCGCGCCCACCGGGGCCGCACCGGGCTCGACCGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑gggt                                                                                                                <  5:191453/148‑3 (MQ=25)                                   ttCATCCAAAAACCGCGACACCTGCTTCGCGGGCACCCCCGCCCCCACGGGGCCACCCCAGGCCGCCACCGCTGTGCCGTACGTGGGGGTGGGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCcaa                                                                                               <  2:186605/148‑1 (MQ=255)                                      aTCGAATAAACGCGACACCTGCTTCGCGGGCACCCCCCCAACCCCAAGGGGCCCCCACGTGTCGCGACCGGTGCCGTTACTGTGGGGGCGGGCGTGGCCCCGAATTGGCCCCACCCGTTTTTCTGGGTTGCGGCCGCCCCCGCcaca                                                                                              >  8:13430/1‑145 (MQ=255)                                                cgcgACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGGGCCGTACCGGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCGGCCAGCCCCTCCAACAACAAGCGCTgg                                                                                  <  7:37307/148‑1 (MQ=38)                                                    acacCTGCTTCGCGGGCACGCCCGCTCCCACAGCTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTaaa                                                                              <  4:32910/148‑1 (MQ=255)                                                            ttCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttcttc                                                                       <  4:181352/147‑1 (MQ=255)                                                            ttCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTtcttct                                                                      <  5:136862/148‑1 (MQ=255)                                                            ttCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGCCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGttcttc                                                                       <  4:46842/147‑1 (MQ=255)                                                                cgGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                  <  2:13688/148‑1 (MQ=255)                                                                       gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTg                                                           >  4:6096/1‑148 (MQ=255)                                                                             tCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTg                                                     >  1:122311/1‑148 (MQ=255)                                                                               ccACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcc                                                   >  5:97541/1‑148 (MQ=21)                                                                                 acaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                  >  5:125233/1‑147 (MQ=255)                                                                                   aGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCACaa                                               >  3:183005/1‑148 (MQ=255)                                                                                     gTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccccccct                                             >  1:203901/1‑144 (MQ=255)                                                                                                   tcGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAgg                               >  6:132432/1‑148 (MQ=255)                                                                                                    ggAACGCTGTCCCTTTCGTGGGGGTGCGGGGGTGCCCGCGAATGGGCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGACAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                              <  6:122990/147‑1 (MQ=255)                                                                                                              gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTTGTAAAGTTCTTCTTTAAGCAACTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATa                    <  6:129310/148‑1 (MQ=255)                                                                                                               ccGTACCGGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc                   <  2:62148/148‑1 (MQ=255)                                                                                                                          ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGccc        >  8:25516/1‑148 (MQ=255)                                                                                                                            aGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCg      <  5:132432/148‑1 (MQ=255)                                                                                                                                ggCGTGCCCGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGc  <  6:97541/148‑1 (MQ=255)                                                                                                                                        |                                                                                                                                             CCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCT‑GGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGC  >  NC_002947/6013750‑6014024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑