New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 401687	54 (0.730)	11 (0.200) +GTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCAT	7/206	6.7	26.2%	intergenic (+214/+215)	PP_0334/PP_0335	transposase/glutathione S‑transferase family protein
	?	NC_002947	= 4486381	31 (0.420)					intergenic (+82/‑15)	PP_3978/PP_3979	hypothetical protein/transposase
Rejected: Coverage evenness skew score above cutoff.

CCTGATGGAGCATTTGCACCGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCAAAGCCCAGGTC  >  NC_002947/4486233‑4486440                                                                                                                                                     |                                                            ccTGATGGAGCATTTGCACCGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTa                                                             >  5:292306/1‑149 (MQ=255)              ttGCACCGTGGCTTTAAGACGGGATCGAAACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTc                                                >  6:33854/1‑149 (MQ=255)                gCACCGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTa                                              >  4:272113/1‑149 (MQ=255)                 cACCGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTAt                                             >  1:79465/1‑149 (MQ=255)                  aCCGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTACGAACTCCAGCATTAAGGGCGATGCTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATg                                            >  1:397693/1‑149 (MQ=255)                    cGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAg                                                      <  4:190514/137‑1 (MQ=255)                    cGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAg                                                      >  3:190514/1‑137 (MQ=255)                    cGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTa                                              <  1:362483/145‑1 (MQ=255)                    cGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTa                                              >  2:362483/1‑145 (MQ=255)                      tGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATgcgc                                         >  7:165548/1‑148 (MQ=255)                         cTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCAAGGATTTCTATGCGCCAAc                                     >  4:379297/1‑149 (MQ=255)                              aGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAg                                 <  8:99314/148‑1 (MQ=255)                               gACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGc                                >  2:217921/1‑148 (MQ=255)                                aCGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGctc                              <  1:400291/149‑1 (MQ=255)                                     aTCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATc                         <  3:272113/149‑1 (MQ=255)                                     aTCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATAACCCTTATCGCCAGGATTTCTAAGCGCCAACGAAGCTCTGATc                         >  6:122191/1‑149 (MQ=255)                                     aTCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATATTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATc                         >  8:50074/1‑149 (MQ=255)                                        gATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGa                      <  4:120512/149‑1 (MQ=255)                                        gATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGa                      <  4:335368/149‑1 (MQ=255)                                         aTACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATc                                                           <  7:79437/111‑1 (MQ=255)                                         aTACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATc                                                           >  8:79437/1‑111 (MQ=255)                                         aTACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGa                      >  1:102851/1‑148 (MQ=255)                                             cGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGATCTTATCCGAAACCg                 >  8:141800/1‑149 (MQ=255)                                              gACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGt                >  6:47339/1‑149 (MQ=255)                                                cAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTc              <  3:153924/149‑1 (MQ=255)                                                   tGGTCTACATGGCGTAAGCGTCCGGCGAACTCTCCTTCCGAACTCCAGCTTTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCaaa           <  5:59644/149‑1 (MQ=255)                                                   tGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCaaa           <  2:187914/149‑1 (MQ=39)                                                   tGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCAATAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCaaa           >  1:327085/1‑149 (MQ=255)                                                     ggCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCAAAg          <  7:337758/148‑1 (MQ=38)                                                     ggCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCAAAGc         >  3:329653/1‑149 (MQ=38)                                                      gCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCAAAGcc        >  2:320861/1‑149 (MQ=37)                                                            tGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCAAAGCCCAGGTc  <  1:217921/149‑1 (MQ=32)                                                                                                                                                     |                                                            CCTGATGGAGCATTTGCACCGTGGCTTTAAGACGGGATCGATACCGACAGTGGGCTACATGGCGTAAGCGTCCGGCGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATCGCCAGGATTTCTATGCGCCAACGAAGCTCTTATCCGAAACCGTTCAAAGCCCAGGTC  >  NC_002947/4486233‑4486440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.