New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5545321 =NA (NA)54 (0.740) 48/278 0.7 93.2% intergenic (‑461/+416) rpsF/rlmB 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
?NC_002947 = 5621245 4 (0.050)coding (19/774 nt) PP_4939 hypothetical protein

Only 100 of 180 total aligned reads displayed.

GCACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGC  >  NC_002947/5621098‑5621389
                                                                                                                                                   |                                                                                                                                                
cattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                 >  5:55380‑M2/147‑149 (MQ=255)
cattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                 <  8:183653‑M2/3‑1 (MQ=255)
cattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                 <  6:55380‑M2/3‑1 (MQ=255)
 attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctct                                                                                                                                                >  8:224703‑M2/146‑149 (MQ=255)
 attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                 >  6:69390‑M2/146‑148 (MQ=255)
  ttgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgttgtgcgacagcgcagcccggaagggctgggtgatctctc                                                                                                                                               <  7:243025‑M2/5‑1 (MQ=255)
  ttgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc                                                                                                                                               <  6:263006‑M2/5‑1 (MQ=255)
  ttgggaaccatagcaaagtattcggcggctgacctacccggatcagtaggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc                                                                                                                                               <  7:32740‑M2/5‑1 (MQ=255)
  acaGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtct                                                                                                                                               >  6:344801‑M2/1‑146 (MQ=255)
    gggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgagcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                              <  1:401072‑M2/6‑1 (MQ=255)
     ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCata                                                                                                                                            <  4:129455‑M2/8‑2 (MQ=255)
     ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                              >  4:346827‑M2/142‑147 (MQ=255)
     ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                             >  4:132078‑M2/142‑148 (MQ=255)
     ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                             <  7:304453‑M2/7‑1 (MQ=255)
     gCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctat                                                                                                                                             <  1:196587‑M2/148‑6 (MQ=255)
      gaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTcatag                                                                                                                                           <  7:361240‑M2/9‑3 (MQ=255)
      gaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAttt                                                                                                                                           <  2:88301‑M2/9‑1 (MQ=255)
      cGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatca                                                                                                                                           >  3:369375‑M2/1‑142 (MQ=255)
       ggCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaa                                                                                                                                          >  8:389354‑M2/1‑141 (MQ=255)
        gCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaa                                                                                                                                         <  7:349519‑M2/149‑10 (MQ=255)
         cATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaac                                                                                                                                        >  5:112625‑M2/1‑139 (MQ=255)
          catagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctcatagaact                                                                                                                                       <  2:188982‑M2/13‑7 (MQ=255)
          catagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctcatagaact                                                                                                                                       >  1:220732‑M2/137‑143 (MQ=255)
           atagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                              >  2:69664‑M2/136‑141 (MQ=255)
              gcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgaggtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAgcg                                                                                                                                   >  1:138505‑M2/133‑149 (MQ=255)
              gcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAgcg                                                                                                                                   >  1:42182‑M2/133‑149 (MQ=255)
              gcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAgc                                                                                                                                    <  7:169604‑M2/16‑1 (MQ=255)
              acaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaa                                                                                                                                      <  5:185809‑M2/146‑13 (MQ=255)
                aGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaaga                                                                                                                                  <  2:4500‑M2/148‑17 (MQ=255)
                      ttcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCCCTCATTTGAAAAGCGCACCGGa                                                                                                                            <  7:65749‑M2/24‑1 (MQ=255)
                           cAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgt                                                                                                                       <  7:136102‑M2/148‑28 (MQ=255)
                            ggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTc                                                                                                                     >  7:104575‑M2/119‑149 (MQ=255)
                             gagTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttct                                                                                                                    >  6:185809‑M2/1‑119 (MQ=255)
                              agTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtatcaaacaaaagataacccactgttctttc                                                                                                                   >  8:100703‑M2/1‑118 (MQ=255)
                               gTCTTCGGTTATTAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTTTCTTTGAGCAGATCGAACCGCCCACAACTGGTAACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttcttt                                                                                                                  >  3:339650‑M2/1‑117 (MQ=255)
                               gTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCCAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttcttt                                                                                                                  >  8:125021‑M2/1‑117 (MQ=255)
                                gacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCa                                                                                                                 >  7:114071‑M2/115‑149 (MQ=255)
                                 acctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTcc                                                                                                                        <  2:419636‑M2/28‑1 (MQ=255)
                                      gTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcga                                                                                                           >  1:258326‑M2/1‑110 (MQ=255)
                                      cccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATtacaa                                                                                                           <  2:406171‑M2/41‑3 (MQ=255)
                                      cccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTAc                                                                                                             <  1:12672‑M2/39‑1 (MQ=255)
                                       ccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGAc                                                                                                          >  5:310181‑M2/108‑149 (MQ=255)
                                         ggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTAc                                                                                                             >  5:245561‑M2/106‑144 (MQ=255)
                                         ggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTAc                                                                                                             <  6:245561‑M2/39‑1 (MQ=255)
                                         ggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTa                                                                                                        >  6:2034‑M2/106‑149 (MQ=255)
                                         gatcagtcggcgaatgcttttctagatctcgatgtgcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTAc                                                                                                             >  1:65004‑M2/106‑144 (MQ=255)
                                           gaATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGCTCTCTTTGAGCAGATCGAAACGCCCAAAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataaaccactgttctttatagcgaaata                                                                                                       <  1:78239‑M2/148‑44 (MQ=255)
                                            tcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCg                                                                                                     >  4:48880‑M2/103‑149 (MQ=255)
                                             aTACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAATCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGGCGACAACTGGTCAGGAGGAGCGTGACGTCACTtctatcaatcaaaagataacccgctgtgctttctagcgaatcaag                                                                                                     <  6:129617‑M2/148‑46 (MQ=255)
                                              agtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGc                                                                                                   <  3:48880‑M2/49‑1 (MQ=255)
                                                  tCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcg                                                                                               <  5:27710‑M2/149‑52 (MQ=255)
                                                     gaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTcaa                                                                                             >  8:270552‑M2/94‑148 (MQ=255)
                                                      gAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGCTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcg                                                                                           >  1:136534‑M2/1‑94 (MQ=255)
                                                        aTGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggg                                                                                         >  1:4500‑M2/1‑92 (MQ=255)
                                                             ttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCg                                                                                      <  6:22631‑M2/62‑1 (MQ=255)
                                                               ctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                             >  8:300623‑M2/84‑90 (MQ=255)
                                                                  tgttttAGCGATCGAAACTCTCTAGGGTGTCTTTGAGCAGATCTAACCGCCCACATCTTGTCACGACGATCGTGACGTCACTtctatcaaagaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggc                                                                                >  2:78239‑M2/1‑82 (MQ=255)
                                                                  gatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTg                                                                                <  2:176596‑M2/68‑1 (MQ=255)
                                                                    ttgtAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcgg                                                                              >  4:395190‑M2/1‑80 (MQ=255)
                                                                     ctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCtt                                                                                                >  1:73901‑M2/78‑129 (MQ=255)
                                                                       cgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                 <  5:210014‑M2/3‑1 (MQ=255)
                                                                        gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGTCTTCAACAACCCGCTCCTGGGc                                                                             <  7:270552‑M2/71‑1 (MQ=255)
                                                                        gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGc                                                                             <  8:114071‑M2/71‑1 (MQ=255)
                                                                        gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGt                                                                           <  6:278515‑M2/73‑1 (MQ=255)
                                                                        gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTg                                                                          >  7:390897‑M2/75‑148 (MQ=255)
                                                                         gCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagt                                                                        <  5:201589‑M2/149‑75 (MQ=255)
                                                                                aaaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcact                                                                 <  6:145638‑M2/149‑82 (MQ=255)
                                                                                aaaCTCTCAAGGGTGGCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCtt                                                                 <  4:80108/149‑1 (MQ=255)
                                                                                 gcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTg                                                                >  6:373281‑M2/66‑149 (MQ=255)
                                                                                  cagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGt                                                               >  4:210647‑M2/65‑149 (MQ=255)
                                                                                   agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGtt                                                              <  1:423943‑M2/86‑1 (MQ=255)
                                                                                     atctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCACATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGtt                                                              >  6:334271‑M2/62‑147 (MQ=255)
                                                                                        aaGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaa                                                                                                                                         <  3:289502‑M2/69‑10 (MQ=255)
                                                                                        aaGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaa                                                                                                                                         >  4:289502‑M2/1‑60 (MQ=255)
                                                                                         gacgtcatgcgcatcctgtttgctgtgcgaaagcgcagcccggaagcgctgggtgatCTCTCATTTGAAACGCGCACCGGATTCCCTCCGCAGTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATg                                                        >  2:303260‑M2/58‑149 (MQ=255)
                                                                                          acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTa                                                            <  2:42182‑M2/88‑1 (MQ=255)
                                                                                                 tttGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtca                                                 <  2:360321‑M2/148‑98 (MQ=255)
                                                                                                 gcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCtt                                                                 <  8:276248‑M2/83‑1 (MQ=255)
                                                                                                 gcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCtt                                                                 >  7:276248‑M2/50‑132 (MQ=255)
                                                                                                     aGCAGAACGAACCGCCCACAACTGCTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggaggcgaagtgttcactcttctatacgtggtcacagc                                             <  2:222884‑M2/148‑102 (MQ=255)
                                                                                                            cGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaaaaaaagaaaacccactgttctttctagcgaaaaaaaccggcgcgcggggtcaatgccggcgaagtgttcactctactatacgtggacacagcaacctgtg                                     <  5:353396‑M2/149‑110 (MQ=255)
                                                                                                              gctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGc                                   >  1:30778‑M2/37‑149 (MQ=255)
                                                                                                              aaCCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgcc                                   <  3:150777‑M2/149‑112 (MQ=255)
                                                                                                                    ccACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagg                             >  5:160423‑M2/1‑32 (MQ=255)
                                                                                                                     gacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATg                            >  4:418661‑M2/30‑149 (MQ=255)
                                                                                                                        agcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAg                         <  6:40822‑M2/123‑1 (MQ=255)
                                                                                                                        aaCTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggat                          <  2:152984‑M2/148‑121 (MQ=255)
                                                                                                                          cgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGa                        >  8:168724‑M2/25‑148 (MQ=255)
                                                                                                                           tGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttccatacgtggtcacagcaagctgtgccgacaggg                            >  5:38303‑M2/1‑25 (MQ=255)
                                                                                                                            cagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGa                                            >  3:312180‑M2/23‑126 (MQ=255)
                                                                                                                             agcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCa                                        >  2:64093‑M2/22‑129 (MQ=255)
                                                                                                                                acgacgAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagctaaaattagaggcgcgcggggtgaatggcggcgaagtgttcactcttctataagtggtcacagcaagctgtgccgacagggattaaggccga                 >  7:401805‑M2/1‑20 (MQ=255)
                                                                                                                                  ggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCgg               >  1:273633‑M2/17‑149 (MQ=255)
                                                                                                                                  gacgaGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatg               <  8:70704‑M2/149‑132 (MQ=255)
                                                                                                                                    aagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGt             <  4:115584‑M2/135‑1 (MQ=255)
                                                                                                                                      gggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTgg           <  2:138505‑M2/137‑1 (MQ=255)
                                                                                                                                       gagTGACGTCACGCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTa                                                            <  6:109483/97‑1 (MQ=255)
                                                                                                                                        gctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTgggg         <  3:210647‑M2/139‑1 (MQ=255)
                                                                                                                                         ctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGc        <  2:273633‑M2/140‑1 (MQ=255)
                                                                                                                                               ccttTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAgc  <  1:154384‑M2/145‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
GCACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGC  >  NC_002947/5621098‑5621389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.