| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,327,121 | 0 | C | T | 52.2% | 11.2 / 119.6 | 92 | intergenic (+97/‑196) | PP_16SE/PP_23SE | 16S ribosomal RNA/23S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base C (26/18); new base T (24/24); total (50/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT > NC_002947/1326974‑1327227 | aaGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCa > 5:324409/1‑149 (MQ=32) tAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGCACCTGGAAATGAGCATTCGCATCGAAt > 4:384770/1‑149 (MQ=17) aaCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCAt > 7:108102/1‑143 (MQ=32) aaCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCAt < 8:108102/143‑1 (MQ=32) aaCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATg > 4:194324/1‑149 (MQ=32) cAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGtt < 6:19748/149‑1 (MQ=17) aaGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTg < 3:198528/149‑1 (MQ=32) aaGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTAAGAACCTGGAAATGAGCATTCTCATCGAATGtt > 6:209944/1‑148 (MQ=17) aGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGa > 7:112728/1‑149 (MQ=17) gTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGAtt > 2:41080/1‑149 (MQ=17) cGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTgg < 3:412445/149‑1 (MQ=32) cGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTgg < 2:363805/149‑1 (MQ=32) ggggAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCtt < 1:180927/148‑1 (MQ=17) gggAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCtttt < 1:41080/149‑1 (MQ=17) ggAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTg > 2:345771/1‑149 (MQ=17) gAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTg > 8:408752/1‑148 (MQ=17) gAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGt > 3:89464/1‑149 (MQ=17) cTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGGGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGt > 5:404794/1‑145 (MQ=17) gCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGtt < 7:408752/149‑1 (MQ=17) cTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTc < 2:223169/149‑1 (MQ=17) gATCACCTCCTTAATCGACGACATCAGCCTGCTGATGGGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCttt < 6:404794/149‑1 (MQ=17) gATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATg > 8:322976/1‑118 (MQ=32) gATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATg < 7:322976/118‑1 (MQ=32) gATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCt < 3:384770/147‑1 (MQ=32) tCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTa > 2:338437/1‑148 (MQ=17) tCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTa > 3:375019/1‑148 (MQ=32) aCCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTaaa > 8:35218/1‑148 (MQ=17) tcctTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAAtt > 2:333703/1‑149 (MQ=17) ctTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTc < 4:89464/148‑1 (MQ=17) ctTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCg < 1:338437/149‑1 (MQ=17) ctTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAAtt < 3:194324/147‑1 (MQ=32) aaTCGACGACATCAGCCTGCTGATGATCTCCCACAAGAATTGCTTGATTCATTGTCGAAGACTTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGa < 5:209944/148‑1 (MQ=12) aaTCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTgg < 2:356416/117‑1 (MQ=32) aaTCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTgg > 1:356416/1‑117 (MQ=32) aTCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCgg < 5:240380/146‑1 (MQ=17) aTCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCgg > 6:240380/1‑146 (MQ=17) aTCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGata > 5:214746/1‑149 (MQ=32) aTCGACGAAATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTTTCGAAGACGTTTT‑TCCTGGTCAGAACCTTGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGata < 5:40067/149‑1 (MQ=255) tCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGatat > 7:247132/1‑149 (MQ=32) gagctcATCAGCAGGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtgt > 1:100607/6‑149 (MQ=255) gacgacATCAGCCTTCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TACTGTTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTTTCAGATCGTTCTTTAAAAATTCGGATAtgt < 1:15162/149‑1 (MQ=11) gacgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCttt < 8:82239/133‑1 (MQ=32) gacgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCttt > 7:82239/1‑133 (MQ=32) gacgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtgt < 1:373800/149‑1 (MQ=32) acgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTg > 1:323091/1‑104 (MQ=17) acgacATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATAtgt > 3:64854/1‑148 (MQ=17) cATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGAt < 2:361490/102‑1 (MQ=32) cATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGAt > 1:361490/1‑102 (MQ=32) atgaGCCTTCTTATGAGCTCGCACAAGAATTTGTTGATTCATTGTCGTAGACGTTTT‑TCCTGGTCAGAACCTGTTAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgatag < 3:401025/145‑1 (MQ=11) aGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgatagata > 6:400447/1‑148 (MQ=17) ccTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgatagata > 7:311907/1‑146 (MQ=32) ctgctgATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGAgata > 6:412454/1‑147 (MQ=17) ctgctgATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGa < 7:43451/149‑1 (MQ=17) ctgctgATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGa < 6:324409/149‑1 (MQ=32) aggctgATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGa < 2:100607/147‑1 (MQ=17) atgaGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTCTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGaa > 1:307755/1‑149 (MQ=12) aGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAacac > 2:267099/1‑148 (MQ=32) ccACACGAATTGCTTGATTCATTGTCGAGGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGttt > 2:348563/1‑149 (MQ=17) ccACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGtt < 7:31645/148‑1 (MQ=17) cacGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCAc > 1:150316/1‑149 (MQ=17) acGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCAct > 8:168625/1‑149 (MQ=17) acGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCtttt < 3:262830/88‑1 (MQ=33) acGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTCGAAATGAGCATTCGCATAGAATGTTGATTTCTGGCtatt > 4:262830/1‑88 (MQ=11) cGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCActg < 8:311907/149‑1 (MQ=32) gAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTaa > 8:59896/1‑103 (MQ=32) gAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTaa < 7:59896/103‑1 (MQ=32) aTTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATGGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCActgctg < 8:250423/149‑1 (MQ=17) aTTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCActgct < 5:400447/148‑1 (MQ=17) ttGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtgg > 2:244113/1‑149 (MQ=17) gCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGTCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggt < 8:112728/148‑1 (MQ=17) gCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggt < 4:61280/148‑1 (MQ=17) gCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggt < 1:333703/148‑1 (MQ=17) gCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggtg > 2:19820/1‑149 (MQ=32) cTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggtg > 1:64513/1‑148 (MQ=17) gATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggtgg < 7:166280/146‑1 (MQ=17) gATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGAt > 2:30616/1‑148 (MQ=32) gATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGAt < 4:375019/148‑1 (MQ=32) aTTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCa < 5:424879/149‑1 (MQ=17) ttCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTATGTCACATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAg > 2:297522/1‑149 (MQ=17) cATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAgg < 7:168625/148‑1 (MQ=17) aTTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggt < 2:271278/139‑1 (MQ=17) aTTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCtggt > 1:271278/1‑139 (MQ=17) aTTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGc > 8:243846/1‑148 (MQ=17) aTTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGc > 7:297196/1‑148 (MQ=17) aTTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGc > 8:372317/1‑148 (MQ=32) gTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAg > 2:15830/1‑149 (MQ=17) tCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTgataga > 2:214741/1‑105 (MQ=32) tCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAgg > 8:105597/1‑149 (MQ=32) gAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAGATTCGGATATGTGATAGAtata < 7:271806/107‑1 (MQ=11) gAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGAtata > 8:271806/1‑107 (MQ=11) gAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGt > 2:394671/1‑148 (MQ=11) gAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTAGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTATTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGTATCAGGCTAAGGt > 6:336098/1‑148 (MQ=2) | AAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTT‑TCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT > NC_002947/1326974‑1327227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |