| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,429 | Δ1 bp | 8.0% | intergenic (‑47/+42) | trmE ← / ← oxaA | GTPase/membrane protein insertase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,429 | 0 | A | . | 8.0% | 221.2 / 14.2 | 75 | intergenic (‑47/+42) | trmE/oxaA | GTPase/membrane protein insertase |
| Reads supporting (aligned to +/- strand): ref base A (29/39); new base . (2/4); total (31/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.75e-01 | |||||||||||
GCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCGG > NC_002947/6281‑6574 | gccggccTTGGCAGCCAGAGGGCCGGACACCCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCa > 6:368969/1‑149 (MQ=255) ccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑g > 5:171892/1‑149 (MQ=255) ggCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑ggg < 1:384767/147‑1 (MQ=255) cAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGt > 6:26983/1‑149 (MQ=255) gCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCC‑CTAGTGGGGCGttt < 5:142289/149‑1 (MQ=255) ccAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCAGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGttt < 1:106245/149‑1 (MQ=255) gagagTGCCGGACAACCTTACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCC‑CTAGTGGGGCGttttt < 6:266398/148‑1 (MQ=255) cAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTT‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑g < 7:177729/139‑1 (MQ=255) cAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCC‑CTAGTGGGGCGttttt < 6:11442/149‑1 (MQ=255) cAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTA‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑g > 8:177729/1‑139 (MQ=255) gagGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTa < 6:98404/149‑1 (MQ=255) gggCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTAtt < 3:1507/149‑1 (MQ=255) ggCCGGACAACCTGACAATTCCCCCACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTGCACGCACAGTGTTCATGCGC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTc < 8:135020/149‑1 (MQ=255) ccGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTcac < 8:105625/149‑1 (MQ=255) cGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTca > 1:75560/1‑148 (MQ=255) cGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTcaca < 7:99966/149‑1 (MQ=255) ggACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAg < 6:248809/149‑1 (MQ=255) ggACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAg < 4:347303/149‑1 (MQ=255) gACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCCCGAACAGTGTTCATGCTC‑GAAAGCCTCTACGAAAAAAACGACAGATAGCAAAAACGCCACACGAG‑GGGGCGTGTATTATTCACAgg > 8:315345/1‑149 (MQ=255) ccTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGc < 6:171892/149‑1 (MQ=255) ccTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTAAAGCTC‑GAAAGCCTCTACGACAAAAACGACAGAAAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGc > 7:169982/1‑149 (MQ=255) aaTTCCCACACCGCCCTGGCCCTTGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACTGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTa < 4:141813/149‑1 (MQ=255) aaTTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGCTGGTGTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTCG‑GGGGCGGTTTTTATTCACAGGCTAGc < 7:355876/143‑1 (MQ=255) aaTTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCGCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTAt > 7:347493/1‑147 (MQ=255) aaTTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGAGGGTTTCACGCCCAGTGTTCATGCTC‑GAAAGCCTCTACGACAACAACGACAGATAGCAAAAACGCCCCACAAG‑GGGGCGTGTTTTCTTAACAGGCTAGCgaga > 8:355876/1‑144 (MQ=255) cccACACAGCCCCGGCCCTGGGCCGT‑GGCGATGGAGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GTGGCGTTTTTTATTCACACGCTAGCGTATATGccc > 6:172384/1‑149 (MQ=255) cGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAagc < 2:75560/149‑1 (MQ=255) gCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAagca < 6:350610/149‑1 (MQ=255) cccGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAagcagc > 5:23373/1‑149 (MQ=255) cGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg > 7:350688/1‑101 (MQ=255) cGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg < 8:350688/101‑1 (MQ=255) ggCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTg < 5:26983/149‑1 (MQ=255) cGATGGCGGCGATGGTTTCACGCACAGTGATCATGCTC‑GAAAGCCTCAACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTATTATTCACAGGCTAGCCTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAgctg > 3:317158/1‑148 (MQ=255) aTGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAgctgct > 8:126454/1‑148 (MQ=255) gcggcgATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGa < 8:360929/149‑1 (MQ=255) cgATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACg > 1:333400/1‑149 (MQ=255) aTGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGc > 5:57738/1‑149 (MQ=255) tGGTTTCACGCACAGTGTTCATTGTC‑GAAAGCCTCTACGACTAAAACGACAGATAGCAAAAACGCCCATGTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTACCCCGTCAAGCAGCAGCGTTTTTGGTAGCTGCTTCGATACgg < 5:172384/147‑1 (MQ=255) gTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGa < 6:23373/148‑1 (MQ=255) aCGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAACACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATg > 7:98674/1‑149 (MQ=255) aTGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACtgctgc > 4:73772/1‑148 (MQ=255) tC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAagc > 8:164037/1‑92 (MQ=255) tC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAagc < 7:164037/92‑1 (MQ=255) tC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTACCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACAGCGAGTGATGTACCACTGCTGCGAAAt > 2:216079/1‑149 (MQ=255) gaaatgctctACGACAAAAACGACAGCTAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCATGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAAt < 8:169982/141‑1 (MQ=255) gAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATc < 2:333400/148‑1 (MQ=255) tctACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAgg > 1:64553/1‑147 (MQ=255) aCGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAgtt > 2:165129/1‑149 (MQ=255) cGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGaaa > 8:10488/1‑135 (MQ=255) cGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGaaa < 7:10488/135‑1 (MQ=255) cGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAAt > 7:113728/1‑136 (MQ=255) cGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAAt < 8:113728/136‑1 (MQ=255) cGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAgtt < 8:47094/148‑1 (MQ=255) cGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTACCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACAGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAgtt < 1:216079/148‑1 (MQ=255) gACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAgttgt > 6:5443/1‑149 (MQ=255) gACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAgttgt < 3:49935/149‑1 (MQ=255) cAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTc < 3:73772/149‑1 (MQ=255) cGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTc < 6:302789/143‑1 (MQ=255) cGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTc > 5:302789/1‑143 (MQ=255) cGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAAcc < 7:126454/149‑1 (MQ=255) aCAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCa < 6:57738/149‑1 (MQ=255) aCAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCa < 8:347493/149‑1 (MQ=255) aTAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGaaa > 3:280906/1‑120 (MQ=255) aTAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGaaa < 4:280906/120‑1 (MQ=255) aataaaaaaCGCCCC‑CTAGTGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTa < 5:300185/143‑1 (MQ=255) aataaaaaaCGCCCC‑CTAGTGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTa > 6:300185/5‑147 (MQ=255) gCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAg < 2:64553/148‑1 (MQ=255) cAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAAcc < 3:188795/139‑1 (MQ=255) cAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAAcc > 4:188795/1‑139 (MQ=255) cAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCa > 8:74153/1‑149 (MQ=255) cAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCa > 7:117566/1‑149 (MQ=255) cAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCa < 5:368969/149‑1 (MQ=255) aaaaCGCCCC‑CTAGTGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCAc > 8:83582/1‑148 (MQ=255) aaaCGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCa < 6:124621/149‑1 (MQ=255) ccccACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCg < 8:117566/149‑1 (MQ=255) cccACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCgg < 8:98674/149‑1 (MQ=255) | GCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGT‑GGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTC‑GAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCGG > NC_002947/6281‑6574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |