| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,458,898 | Δ1 bp | 7.1% | intergenic (+23/‑39) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,458,898 | 0 | T | . | 7.1% | 210.4 / 10.7 | 70 | intergenic (+23/‑39) | leuS/PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (27/36); new base . (2/3); total (31/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.91e-01 | |||||||||||
CCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGA > NC_002947/5458751‑5459043 | ccAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGAtt < 3:188653/149‑1 (MQ=255)ccAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGAtt > 2:229749/1‑149 (MQ=255) aGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGc > 8:64330/1‑149 (MQ=255) aGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGc < 6:318418/149‑1 (MQ=255) gCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCg > 8:211729/1‑149 (MQ=255) gCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCg < 7:124781/149‑1 (MQ=255) ccGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCgg < 6:228310/149‑1 (MQ=255) cgcgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCggg < 4:304985/149‑1 (MQ=255) gaagaaGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGTgg < 5:245163/149‑1 (MQ=255) gaagaaGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTgg < 3:190306/149‑1 (MQ=255) gaagaaGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGGCAACATCGTCGCCACCTGATGAAAACGCCCACCCGC‑ATCGAATGCGGGTgg > 4:108593/1‑149 (MQ=255) agaagTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGTGGGc < 1:61077/149‑1 (MQ=255) tCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCg < 5:286206/145‑1 (MQ=255) tCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCg > 6:286206/1‑145 (MQ=255) tCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑aa > 3:321987/1‑148 (MQ=255) aGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGc < 4:321987/149‑1 (MQ=255) aGCCGCTGCCCGCAGCAACGAGAATGTCCTGAGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGc < 3:53475/149‑1 (MQ=255) gCCGCTGCCCTCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGCCCATGCGCAAGGGCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGcc < 6:363239/149‑1 (MQ=255) gCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGcc > 5:191957/1‑149 (MQ=255) cccGCAGCAACGAGACTGGCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCCCCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAgg < 3:108593/149‑1 (MQ=255) cGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑TTCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGa < 6:140181/149‑1 (MQ=255) gcagcaACGTGAATGTCCTGCGCTTAATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTAAACATCTTCGCCATCTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAg < 7:10869/149‑1 (MQ=255) gcagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAg > 8:250451/1‑149 (MQ=255) ccgcaACGAGAATGTCCTGCGCTTCATCGATTGCCTGACCATCCGCATGGGCATCGTGGTACCGGTCAAGCTGGTCAACATCGTCCCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCTG‑AACAGGCCCAAAAGGGAGc < 8:356638/147‑1 (MQ=255) cagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATGGTCGCCAACTGATCAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGc < 4:345909/149‑1 (MQ=255) gagaATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAacaaca > 7:137832/1‑149 (MQ=255) gaATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATg < 3:186842/149‑1 (MQ=255) aTGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGAt < 7:223725/149‑1 (MQ=255) tGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATc < 6:174960/149‑1 (MQ=255) gTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGt < 2:222141/111‑1 (MQ=255) gTCCTGCGCTTCATCGATGGCCTGACCAACCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGt > 1:222141/1‑111 (MQ=255) cTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAAc < 1:229749/149‑1 (MQ=255) tGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGc < 1:360608/132‑1 (MQ=255) tGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGc > 2:360608/1‑132 (MQ=255) cgcTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACg < 7:211729/147‑1 (MQ=255) cTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAAt > 2:229964/1‑149 (MQ=255) aTCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGc < 6:191957/149‑1 (MQ=255) tCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTAGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCt < 6:229868/149‑1 (MQ=255) gATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTg < 1:229964/148‑1 (MQ=255) ctgggCCTGCCCATCCGCAAGGCCTTCGGGGTACCGGCCAAGCTGCTCAACATCGTCCCCAACTGATGAAAACCCCCACCCGC‑TTCTATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTgg < 4:194197/146‑1 (MQ=255) aTGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTgg > 5:34094/1‑148 (MQ=255) ggCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTaa > 2:300218/1‑149 (MQ=255) cTGACCATCCGCATGGTCATCGTGGTCCCGGGCATGCTGGTAAACTTCGTCGCCAACTTATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGc < 6:240327/140‑1 (MQ=255) cTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGAGTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGc > 5:240327/1‑140 (MQ=255) cATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTg > 6:25/1‑149 (MQ=255) aTCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTgg < 3:138608/149‑1 (MQ=255) tCCGCAAGGTCATCGTGGTACCTGGCAAGCTGGTCAACATCTTCGCCAACTGATGAAAACGACCACCCGC‑ATCGATTGCGGGTTGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAACCGCAATTTGCTGGTAATCGTCCTGGc > 5:260077/1‑149 (MQ=255) tCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGc < 7:64330/149‑1 (MQ=255) tCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGc < 3:77971/149‑1 (MQ=255) aaGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCa < 6:34094/149‑1 (MQ=255) gTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGCTCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGc > 6:62832/1‑149 (MQ=255) ccGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCg > 3:172235/1‑149 (MQ=255) ggcAACATCGTCGCCAACTGATTAAAACGCCCCCCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTgc < 8:137832/147‑1 (MQ=255) gTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTgc > 3:123033/1‑149 (MQ=255) cAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGTCACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTgcg > 1:300895/1‑149 (MQ=255) cgtcgCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTATTCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCAcc > 4:340471/1‑149 (MQ=255) gCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGgcg > 3:181842/1‑149 (MQ=255) gCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGgcg < 4:172235/149‑1 (MQ=255) ccAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGgcgc < 4:123033/149‑1 (MQ=255) aaCTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCa > 2:296460/1‑149 (MQ=255) aCTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCAc > 7:125094/1‑149 (MQ=255) atgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGa < 1:296460/148‑1 (MQ=255) atgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAg < 5:25/149‑1 (MQ=255) gaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCt > 2:246564/1‑149 (MQ=255) gaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCt > 5:348341/1‑149 (MQ=255) ccccccccCGC‑TTCTATTGCGTGTGGGAGT‑AACAGGCCCAAAAGGGAGCAACAACATGATAAAACGCAATTTGCTGGTAATCGGCCTTGCGGTCATGATCAGCGCCTTCGGTTTCCATCTGCGCGGCACCGGCGCCACCGAGCTGAGCg < 6:260077/147‑1 (MQ=255) gCCCACCCGCAATCGA‑TGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGCGCGt > 8:138064/1‑149 (MQ=255) c‑ATCGATTGCGGGTGTGCGG‑AACAGGCCCAAAATGGAGCAACAACATGATCAAACGCAATTTGCTg < 5:301234/66‑1 (MQ=255) c‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAAt > 8:365051/1‑149 (MQ=255) c‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAAt > 3:193004/1‑149 (MQ=255) c‑ATCGATTGCGGGTGGGCGG‑AACAGGCCAAAAAGGGAGCAACAACATGATAAAACGCAATTTGCTg > 6:301234/1‑66 (MQ=255) cGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGa > 7:305507/1‑149 (MQ=255) | CCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGG‑AACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGA > NC_002947/5458751‑5459043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |