| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,988,911 | Δ1 bp | 26.5% | intergenic (+205/‑341) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,988,911 | 0 | A | . | 26.5% | 241.9 / 96.2 | 103 | intergenic (+205/‑341) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Reads supporting (aligned to +/- strand): ref base A (30/42); new base . (14/13); total (46/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
GGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCA > NC_002947/5988766‑5989054 | ggcgCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGTGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGaa < 2:250793/149‑1 (MQ=255)ggcgCTGCGCGGGGACACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGaa < 7:247767/149‑1 (MQ=255) gcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGaaac > 4:168938/1‑148 (MQ=255) cgcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGaaacaaa < 1:166651/147‑1 (MQ=255) cgcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGaaacaaa > 2:166651/1‑147 (MQ=255) gggTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAg > 4:320622/1‑149 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg < 2:282133/149‑1 (MQ=255) cccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCggg > 7:9982/1‑149 (MQ=255) cccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCggg < 7:169329/149‑1 (MQ=255) ccGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATAGCGTCGTACAAACAAGGCGGTCGAGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGtt > 6:83321/1‑149 (MQ=2) gCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGtt > 3:87657/1‑148 (MQ=255) tCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcc > 1:77884/1‑149 (MQ=11) tACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGAGGGTTTAcccg < 1:8097‑M2/149‑5 (MQ=255) cGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCcgcg > 7:312552/1‑148 (MQ=11) gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGCGCGGGTTTCcccgcg < 6:384389‑M2/148‑7 (MQ=255) gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTa > 8:205593/1‑142 (MQ=255) gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTa < 7:205593/142‑1 (MQ=255) tttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcg < 5:153200‑M2/147‑7 (MQ=255) tttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAg > 8:139931/1‑149 (MQ=11) tCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccg < 8:122202‑M2/149‑15 (MQ=255) gggCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcg < 3:134634‑M2/149‑17 (MQ=255) ggCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgc < 1:384295‑M2/149‑18 (MQ=255) ggCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGACAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgc < 2:355274‑M2/149‑18 (MQ=255) ccAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCcgcccgcg > 5:306057/1‑147 (MQ=9) caattATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑GAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgggc > 3:218777/4‑149 (MQ=14) ttATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAccc > 5:39357/1‑128 (MQ=2) tCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgct < 6:375937‑M2/149‑28 (MQ=255) tCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCG‑AGCGCCGCCCGCGCGGCGCttc > 1:142245/1‑147 (MQ=2) ccTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc < 7:301570‑M2/149‑29 (MQ=255) ccTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgct > 5:375937‑M2/1‑121 (MQ=255) tgtgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga < 7:178486‑M2/149‑31 (MQ=255) tgtgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga < 1:354696‑M2/149‑31 (MQ=255) tgtgGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcga < 5:392535‑M2/149‑31 (MQ=255) gACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctca > 1:355274‑M2/1‑114 (MQ=255) gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg > 2:140266/1‑149 (MQ=255) gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgc < 7:122202/149‑1 (MQ=255) aCGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcg > 5:201124‑M2/1‑107 (MQ=255) aCGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgcgc < 8:301570/149‑1 (MQ=255) cgcgAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGcc < 6:392535/149‑1 (MQ=255) gAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCa > 2:326394/1‑148 (MQ=255) cctTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcct < 3:69966‑M2/149‑53 (MQ=255) ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTa > 3:175406/1‑149 (MQ=255) ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTa < 2:354696/149‑1 (MQ=255) ccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTa > 6:154562/1‑149 (MQ=255) ggggCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccgg < 7:119276‑M2/149‑57 (MQ=255) gcgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgc < 8:106292/133‑1 (MQ=255) gcgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGgc > 7:106292/1‑133 (MQ=255) atgtctcgaTATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaac < 2:365874‑M2/145‑62 (MQ=255) aCGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAgg < 1:326394/149‑1 (MQ=255) tctCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcg < 8:51316‑M2/113‑30 (MQ=255) tctCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcg > 7:51316‑M2/2‑85 (MQ=255) ccTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGc < 2:202365/142‑1 (MQ=255) ccTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGc > 1:202365/1‑142 (MQ=255) cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgc > 4:144073‑M2/1‑85 (MQ=255) cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgc < 3:144073‑M2/100‑16 (MQ=255) cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCAcc > 2:131531/1‑149 (MQ=255) cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctc > 7:163112‑M2/1‑84 (MQ=255) cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctc < 8:163112‑M2/137‑54 (MQ=255) tCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggctctgaaaatactccggcaaacacct < 3:224775‑M2/148‑66 (MQ=255) tCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacct < 2:14594‑M2/148‑66 (MQ=255) tCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacct < 6:60790‑M2/148‑66 (MQ=255) gATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTg < 6:153200/148‑1 (MQ=255) gATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctca < 3:8665‑M2/148‑68 (MQ=255) tCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGTGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACAAGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGc > 3:213974/1‑149 (MQ=255) gcgTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGaa < 1:140266/145‑1 (MQ=255) gcgTCGTACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattc > 1:365874‑M2/1‑75 (MQ=255) gtACAAACAAGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgc < 5:198919‑M2/149‑80 (MQ=255) tACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGc < 5:154562/149‑1 (MQ=255) tgccccaaggcggTCGCGCGCAAATCCCG‑CAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaa > 7:113541‑M2/6‑83 (MQ=255) acaaacaaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGc > 2:364310/1‑148 (MQ=255) aaacaaGGCGGTCGCGCGCGCCTGGCAGCAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCaa > 1:17786/1‑149 (MQ=255) aaacaaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAt < 7:53304/149‑1 (MQ=255) aaacaaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAt > 1:83465/1‑149 (MQ=255) cccaaggCGGTCGCGCGCAAATCCCG‑CAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggc > 7:297976‑M2/3‑80 (MQ=255) cccaaggCGGTCGCGCGCAAATCCCG‑CAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggc < 8:297976‑M2/121‑44 (MQ=255) aaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGGGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAATAACTATCGCCAGGCACCCGGAAGCCATCCTGCAATTTcc < 2:8097/149‑1 (MQ=255) aaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc > 6:90340/1‑149 (MQ=255) aaGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc < 5:183186/149‑1 (MQ=255) aaGGCGGTCGCGCGCGACTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccact > 5:60790‑M2/1‑62 (MQ=255) aGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCt < 2:384295/149‑1 (MQ=255) gTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCGGCAATTTCCTGACGa > 8:336084/1‑149 (MQ=255) cgcgcgcCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCAc > 6:386372/1‑149 (MQ=255) cgcgaCTGGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaac > 4:69966‑M2/1‑50 (MQ=255) gcCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCAc < 1:47885/144‑1 (MQ=255) gcCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCAc > 2:47885/1‑144 (MQ=255) gactgGTG‑CAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgcc < 6:184612‑M2/147‑103 (MQ=255) gCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCgccgcc < 8:178486/148‑1 (MQ=255) gCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCa > 3:193115/1‑149 (MQ=255) a‑caGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCAt > 6:114965/1‑148 (MQ=255) caGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGa < 4:175406/149‑1 (MQ=255) ggaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcg < 4:134634/149‑1 (MQ=255) gaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgc > 3:238110/1‑149 (MQ=255) gaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgc < 3:136370/149‑1 (MQ=255) gaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgc > 4:136370/1‑149 (MQ=255) gaggGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaacgccgccccctcaa < 1:156178‑M2/148‑113 (MQ=255) ttGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGcgcgggcggcgctcgatctcccaggcgctgaaactctcccggcgaacacctcccaggcgctgaaaatcccccggcgaacacctcccaggcgctgaaaacctccc < 1:194771‑M2/149‑105 (MQ=255) ttGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTc < 5:386372/149‑1 (MQ=255) tGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtcca < 5:349996‑M2/114‑86 (MQ=255) tGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtcca > 6:349996‑M2/1‑29 (MQ=255) ggCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTca < 5:90340/148‑1 (MQ=255) | GGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCA‑CAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCA > NC_002947/5988766‑5989054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |