Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,402,317	Δ1 bp	5.5%	coding (50/330 nt)	PP_2103 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,402,317	0	T	.	5.5%	235.7 / 6.8	73	coding (50/330 nt)	PP_2103	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (35/34);  new base . (2/2);  total (37/36)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.98e-01

ATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAGGCGCAC  >  NC_002947/2402170‑2402455                                                                                                                                                      |                                                                                                                                           aTGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCtt                                                                                                                                           <  4:138140/149‑1 (MQ=255)     cccACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTgcg                                                                                                                                        >  7:140991/1‑148 (MQ=255)       cacaGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGCAAGGCGCTGCTGCGCC‑TGCGCat                                                                                                                                     <  8:289316/149‑2 (MQ=255)       cacaGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAg                                                                                                                                     <  4:27119/149‑1 (MQ=255)        acaGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGCAAGGCGCTGCTGCGCC‑TGCGCatg                                                                                                                                    <  2:342914/149‑3 (MQ=255)        acaGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGt                                                                                                                                    >  3:57338/1‑149 (MQ=255)           gTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTcg                                                                                                                                 >  7:256325/1‑149 (MQ=255)              gcgcATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTcgcgc                                                                                                                              >  4:48312/1‑149 (MQ=255)              gcgcATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTcgcgc                                                                                                                              <  8:71313/149‑1 (MQ=255)                 cATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCggg                                                                                                                           <  8:205621/149‑1 (MQ=255)                      ttGATACACAGGCCTTCAAGTAACGAGCTCCCAATACCGCGCACGCGGCGCAGCGCTTCACGCAACTCACCGGCCTCATTACGGATTTCATGGCGGAGCAT‑TTCAATTCTC‑AGGCGCAGCAGCGCCTTGCGCAGAACGCTCGGCTTAcg                                                                                                                      >  4:272539/1‑149 (MQ=255)                           aCCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTAcgc                                                                                                                     >  6:264741/1‑145 (MQ=255)                           aCCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTAcgc                                                                                                                     <  5:264741/145‑1 (MQ=255)                            cccAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGtt                                                                                                                >  1:361841/1‑149 (MQ=255)                             ccAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAg                                                                                                                                     <  8:221046/127‑1 (MQ=255)                             ccAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAg                                                                                                                                     >  7:221046/1‑127 (MQ=255)                              cAGGCCTTCATGTAGCGATCTGCCCATACCGCGCACGCGGCGCATCGGGTCAACCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCATCTTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGtt                                                                                                                         <  1:276081/139‑1 (MQ=255)                              cAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGtt                                                                                                                         >  2:276081/1‑138 (MQ=255)                               aGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTgg                                                                                                             <  8:256325/149‑1 (MQ=255)                                 gCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCa                                                                                                           <  6:343167/149‑1 (MQ=255)                                    ttCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGtt                                                                                                        >  2:171693/1‑149 (MQ=255)                                       aTGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTg                                                                                                     >  4:256122/1‑149 (MQ=255)                                        tGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTgg                                                                                                    <  4:143163/149‑1 (MQ=255)                                            gCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAgg                                                                                                >  2:129393/1‑149 (MQ=255)                                             cGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGc                                                                                               <  2:361841/149‑1 (MQ=255)                                               aGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGGTTGGCAGTGCTGGCAGGcg                                                                                              >  8:124832/1‑147 (MQ=255)                                                gCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCa                                                                                            >  3:166755/1‑149 (MQ=255)                                                   gCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATgg                                                                                         >  4:217680/1‑149 (MQ=255)                                                    cccATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATg                                                                                          <  4:57338/147‑1 (MQ=255)                                                     ccATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGc                                                                                        >  3:203439/1‑148 (MQ=255)                                                          ccGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAgg                                                                                  <  1:129393/149‑1 (MQ=255)                                                          ccGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAg                                                                                   <  4:380276/148‑1 (MQ=255)                                                           cgcgCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACCGgc                                                                                 >  8:8761/1‑149 (MQ=255)                                                           cgcgCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGgc                                                                                 >  5:146009/1‑149 (MQ=255)                                                             tgcACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGgcgc                                                                               <  6:255406/148‑1 (MQ=255)                                                               cACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTc                                                                             <  6:146009/149‑1 (MQ=255)                                                                aCGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTcc                                                                            >  2:13735/1‑149 (MQ=255)                                                                 cgcgGCGCAGCGGTTCAAGCAACTGAACGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTccc                                                                           >  7:138249/1‑149 (MQ=255)                                                                    ggcgCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGt                                                                        <  3:217680/149‑1 (MQ=255)                                                                    ggcgCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGt                                                                        >  8:348003/1‑149 (MQ=255)                                                                     gcgcAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGt                                                                        <  4:192459/148‑1 (MQ=255)                                                                     gcgcAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGt                                                                        >  3:192459/1‑148 (MQ=255)                                                                        cAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCtt                                                                    <  1:28592/149‑1 (MQ=255)                                                                         aGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGAGCAT‑TTCCATCCGC‑AGGCGCAGCAGCCCCTTCCGCAGTTCGCGCGGGTTACGCGTCTTAGGCAGTTCTGGCACGCTCATGGCAACAGACGCTCCCTGTCCTTg                                                                   >  7:154934/1‑149 (MQ=255)                                                                          gCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTgg                                                                  <  4:41940/149‑1 (MQ=255)                                                                           cGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTgg                                                                  >  5:108948/1‑148 (MQ=255)                                                                           cGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGc                                                                 <  4:203439/149‑1 (MQ=255)                                                                                   gCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTtcgt                                                         >  8:339282/1‑149 (MQ=255)                                                                                    cAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTtcgtc                                                        <  8:138249/149‑1 (MQ=255)                                                                                          aCCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGGGGGTTACGCGTGTTTGGCAGTTCTTGCAGGCTCATGGCAACAGGCGCTCCCTGTCCtt                                                                    <  3:38569/131‑1 (MQ=255)                                                                                          aCCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAgg                                                    <  4:166755/147‑1 (MQ=255)                                                                                          aCCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGAGC‑AGGCGCATCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAgg                                                    <  1:65528/147‑1 (MQ=255)                                                                                          aCCGGACTCATGACGGATTTCCTGGCGGAGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGGGTTTGGGAGTTCTGGCAGGATCATGGCAACATGCGCTCCCTGTACtt                                                                    >  4:38569/1‑131 (MQ=255)                                                                                           ccGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCGATGCGC‑AGGCGCAGCAGGGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCATGTGCGTCGTGGGTg                                                 <  8:140991/149‑1 (MQ=255)                                                                                           ccGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAgg                                                    >  4:56479/1‑146 (MQ=255)                                                                                           ccGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAgg                                                    <  3:56479/146‑1 (MQ=255)                                                                                               aCTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGgcgc                                             <  7:348003/149‑1 (MQ=255)                                                                                                   aTGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGc                                                                 <  3:130755/125‑1 (MQ=255)                                                                                                   aTGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGc                                                                 >  4:130755/1‑125 (MQ=255)                                                                                                    tGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAg                                        >  6:45716/1‑149 (MQ=255)                                                                                                      aCGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAggg                                      <  3:48312/149‑1 (MQ=255)                                                                                                          atgtCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCgat                                  <  6:84489/146‑1 (MQ=255)                                                                                                                  gCGGGGCAT‑TTCCATGCTC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATtcg                            <  7:363671/147‑1 (MQ=255)                                                                                                                          t‑ttCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACAccg                  >  1:362546/1‑149 (MQ=255)                                                                                                                                 tGCGCAAGGCGCTGCTGCGCC‑TGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCt            >  5:191845/1‑149 (MQ=255)                                                                                                                                   cgc‑aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCtt           >  4:33354/1‑148 (MQ=255)                                                                                                                                    gc‑aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCtt           >  1:113695/1‑147 (MQ=255)                                                                                                                                    gc‑aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCtt           >  7:168023/1‑147 (MQ=255)                                                                                                                                    gc‑aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCtt           >  5:237262/1‑147 (MQ=255)                                                                                                                                     c‑aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAg        <  2:215360/149‑1 (MQ=255)                                                                                                                                     c‑aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAg        <  1:171693/149‑1 (MQ=255)                                                                                                                                      aaggcgctgCTGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTGGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAg        >  2:311148/2‑149 (MQ=255)                                                                                                                                       aggcgcagCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAgg       <  7:124832/149‑1 (MQ=255)                                                                                                                                           gctgctgcgcC‑TGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAGGCGCAc  >  7:135327/7‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                           ATGCCCCACAGTGGCGCATGCTTGATACCCAGGCCTTCATGTAGCGAGCTGCCCATACCGCGCACGCGGCGCAGCGGTTCAAGCAACTGACCGGACTCATGACGGATTTCCTGGCGGTGCAT‑TTCCATGCGC‑AGGCGCAGCAGCGCCTTGCGCAGTTCGCGCGGGTTACGCGTGTTTGGCAGTTCTGGCAGGCTCATGGCAACAGGCGCTCCCTGTCCTTGGCAAGTTCGTCGAGGGTGGCGCCGAAGGGCGATGATTCGTCGAACACCGCCGCCTTCAGGCGCAC  >  NC_002947/2402170‑2402455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑