| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,962,191:1 | +C | 5.9% | coding (247/1356 nt) | atoC ← | two‑component system DNA‑binding transcriptional activator AtoC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,962,191 | 1 | . | C | 5.9% | 343.5 / 14.1 | 85 | coding (247/1356 nt) | atoC | two‑component system DNA‑binding transcriptional activator AtoC |
| Reads supporting (aligned to +/- strand): ref base . (40/40); new base C (3/2); total (43/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.86e-01 | |||||||||||
TCGCAGGCCACCGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAGCGCTTCTTCGGC > NC_002947/4962043‑4962335 | tCGCAGGCCACCGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATg > 1:157626/1‑149 (MQ=255) gCCACCGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGt < 8:119189/149‑1 (MQ=255) aCCGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGtcat < 7:45255/149‑1 (MQ=255) aCCGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGtcat < 1:388464/149‑1 (MQ=255) aCCGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGC‑GCATGCCGCCGtcga < 7:118227/149‑3 (MQ=255) ccGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGtcat > 3:51685/1‑148 (MQ=255) cGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGC‑GCATGCCGCCGtcgagc < 5:159715/149‑5 (MQ=255) ggCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGC‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCaa < 2:187399/149‑1 (MQ=255) ccTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGAGGCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGC‑GCATGCCGCCGtcgagcgtg > 1:291499/1‑142 (MQ=255) cttcttCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGc > 4:281509/1‑149 (MQ=255) cttcttCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGc > 5:264432/1‑149 (MQ=255) tgcgagCCGGCCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCAc > 4:21819/6‑149 (MQ=255) acacGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCg < 1:284736/139‑1 (MQ=255) acacGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCg > 2:284736/1‑139 (MQ=255) acacGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACtgtg < 2:157626/148‑1 (MQ=255) acacGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTgg < 3:171652/149‑1 (MQ=255) acGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGgct > 3:287082/1‑149 (MQ=255) acGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGgct > 3:236041/1‑149 (MQ=255) gCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGgctgc > 6:115709/1‑149 (MQ=255) gcggcATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTggcg < 6:128037/149‑1 (MQ=255) aTGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGtc > 5:369739/1‑112 (MQ=255) aTGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGtc < 6:369739/112‑1 (MQ=255) ccGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCAACGGCAACTGTGGCTGCTGGCGGCGAAACt > 1:257155/1‑149 (MQ=255) gCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTgg < 3:21819/149‑1 (MQ=255) ccACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCt > 7:326606/1‑148 (MQ=255) ccACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTc < 8:79259/149‑1 (MQ=255) cACGAGGTTGA‑GCAGCGCCTTGGGCTCGAAGGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCt > 1:31878/1‑147 (MQ=255) cACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCa < 3:281509/149‑1 (MQ=255) aCGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAg < 4:236041/149‑1 (MQ=255) gAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGc > 1:390466/1‑148 (MQ=255) ggTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAAc > 5:199888/1‑149 (MQ=255) ggTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAAc < 6:199888/149‑1 (MQ=255) gTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACt > 5:85158/1‑149 (MQ=255) ttGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTg < 6:264432/149‑1 (MQ=255) tGA‑GCAGCGCCTTGGACTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCCCCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTgg > 8:58042/1‑149 (MQ=255) a‑gcagcGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGt < 4:323274/148‑1 (MQ=255) gcagcGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGc < 4:51685/149‑1 (MQ=255) gcCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCccatc < 2:390466/149‑1 (MQ=255) gcCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCccatc < 8:326606/149‑1 (MQ=255) ccTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTAAGCAACTGGTGCccatc > 2:254080/1‑148 (MQ=255) ttGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCccatcca > 8:107743/1‑148 (MQ=255) gggCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTggcg > 4:243579/1‑114 (MQ=255) gggCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTggcg < 3:243579/114‑1 (MQ=255) ggCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCgg > 6:307235/1‑95 (MQ=255) ggCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCgg < 5:307235/95‑1 (MQ=255) ggCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATAcc > 7:214539/1‑149 (MQ=255) aaCGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGTGCAACTGGCTCAGCAACTGGTGCCCATCCATACCgg > 2:76376/1‑145 (MQ=255) aaCGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGTGCAACTGGCTCAGCAACTGGTGCCCATCCATACCgg < 1:76376/145‑1 (MQ=255) tttGACCAGGTTGTCGGCGGCCCCTTGGCGAATGGCCTCGACCGAACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCATCAACTTGTGCCCATCCATACCGGGCATGtt < 7:58042/147‑1 (MQ=255) gACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACTGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGt > 2:253378/1‑149 (MQ=255) gACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATa < 8:47820/133‑1 (MQ=255) gACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATa > 7:47820/1‑133 (MQ=255) gACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCggg > 5:174896/1‑138 (MQ=255) gACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCggg < 6:174896/138‑1 (MQ=255) ccAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCa > 2:86623/1‑149 (MQ=255) ccAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCa < 1:338581/149‑1 (MQ=255) aGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGacc > 6:393624/1‑149 (MQ=255) gcCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCccat < 6:11714/110‑1 (MQ=255) gcCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCacat > 5:11714/1‑110 (MQ=255) gcCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGACTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTg > 2:283130/1‑148 (MQ=255) cTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTTCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAAc > 7:176739/1‑149 (MQ=255) ggCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAAcgc < 4:287082/148‑1 (MQ=255) gcgcATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGt < 8:214539/149‑1 (MQ=255) cgcATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTc < 2:257155/149‑1 (MQ=255) gcATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCt > 4:230777/1‑149 (MQ=255) cATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCtt < 5:115709/149‑1 (MQ=255) aTGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTc < 5:393624/149‑1 (MQ=255) ggCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTc > 6:192011/1‑147 (MQ=255) gCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGa < 2:31878/148‑1 (MQ=255) cTCGACCGCACGCTCGACGGCGGAATG‑CGCCGTCATCAACAGCACCGGCAACTGTCGCTGCTGGCGGCGCAACTGGCTCAGCACCTGGTGCCCATACATACCGGGCATGTTGAAGTCACTGACCACCAGCCTGAACGAGTCTTCGAgaa > 2:76108/1‑147 (MQ=255) gACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACTAGGCTGAACGCGTCTTCGAGTACg < 2:7576/148‑1 (MQ=255) gACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTAc < 1:86623/147‑1 (MQ=255) gACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACg < 6:85158/148‑1 (MQ=255) cACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTc > 6:228099/1‑148 (MQ=255) gCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAgc > 8:159654/1‑149 (MQ=255) gatgACGGC‑GCATGCCGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGTGTCTTCGAGTACGGCCTCCAgcg > 6:293027/4‑149 (MQ=255) atgACGGC‑GCATGCCGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAgcgc > 8:215558/3‑149 (MQ=255) cGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATg < 8:49345/95‑1 (MQ=255) cGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATg > 7:49345/1‑95 (MQ=255) gACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGACTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAgcgc < 1:283130/147‑1 (MQ=255) aCGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAGCGcttc > 8:268918/1‑149 (MQ=255) ggcggcATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAGCGcttctt > 3:68565/1‑149 (MQ=255) ggcggcATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAGCGcttctt < 4:165512/149‑1 (MQ=255) ggcggcATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAGCGcttctt > 5:198647/1‑149 (MQ=255) ggcATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAGCGCTTCTTCgg > 7:225930/1‑149 (MQ=255) gcATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAGCGCTTCTTCGGc < 5:228099/149‑1 (MQ=255) | TCGCAGGCCACCGGCCCTTCTTCGCCGGTCACACGCCCGGCGGCATGCCGCTCCACGAGGTTGA‑GCAGCGCCTTGGGCTCGAACGGTTTGACCAGGTAGTCGGCGGCGCCTTGGCGCATGGCCTCGACCGCACGCTCGACGGCGGCATG‑CGCCGTCATCAACAGCACCGGCAACTGTGGCTGCTGGCGGCGCAACTGGCTCAGCAACTGGTGCCCATCCATACCGGGCATGTTGACGTCACTGACCACCAGGCTGAACGCGTCTTCGAGTACGGCCTCCAGCGCTTCTTCGGC > NC_002947/4962043‑4962335 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |