| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 503,837:1 | +C | 13.9% | intergenic (+40/‑111) | PP_0414 → / → rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 503,837 | 1 | . | C | 13.9% | 236.1 / 37.7 | 72 | intergenic (+40/‑111) | PP_0414/rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| Reads supporting (aligned to +/- strand): ref base . (25/37); new base C (4/6); total (29/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.16e-01 | |||||||||||
ATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCATTCTCTCT > NC_002947/503690‑503983 | aTTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCg > 2:29729/1‑148 (MQ=255) ttGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑Ga < 3:353615/149‑1 (MQ=255) gCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGGTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑Gaa < 8:80726/148‑1 (MQ=255) gCCGCGGCGGCGACCTTGCTGATGGCGGTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGATGAGGACTCAACAGCCGGCTTTATGATGGCTTGCGTGTACCGGCCTCTTCGCGGCTAAAGCCG‑Ga < 8:353123/147‑1 (MQ=255) ccGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTACCTGTGCCGGCCTCTTC‑CGGCTTTAGCCGCGAaga < 7:256344/149‑1 (MQ=38) cgcgGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTATTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAagag > 2:30787/1‑149 (MQ=255) gcggcggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTGGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGCCGGCCTCTTC‑CGGCTTTAGCCGCGAAGAgg < 1:280113/149‑1 (MQ=38) ggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGc < 8:221065/149‑1 (MQ=255) ccTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGCCGGCCTCTTC‑CGGCTTTAGCCGCGAAGAGGC‑CGGTACAgg < 3:291222/149‑1 (MQ=37) tGATTGCTTTCTCGGTGTTATTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGt < 4:318925/149‑1 (MQ=255) aTTGCGTTCTCGGTGTTTTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTg < 1:30787/149‑1 (MQ=255) aTTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTg < 6:76097/149‑1 (MQ=255) gCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGt < 2:29659/148‑1 (MQ=255) gCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGt < 1:29729/148‑1 (MQ=255) ctcGGGGTTGTTGCTGCGGACCCTGGAGGGGTGGCGGGGGCGTAGCGATAAGCGGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAACGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGaca < 3:364761/148‑1 (MQ=255) tcGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGacac > 2:345661/1‑148 (MQ=255) ggTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCaa > 4:153144/1‑149 (MQ=255) gtgtTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCaaa < 2:50764/149‑2 (MQ=255) tgttgtTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAAtt > 4:122093/1‑149 (MQ=255) tgctgcTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATAc > 1:37195/1‑148 (MQ=255) ctgctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGCACGGCACAGGTTGCGTTGGTCGACACCAATTGATACCa < 1:69479/149‑1 (MQ=255) gctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGATGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGACTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CCGCACAGGTTGCTTTGGTCGACACCAATTGATACCAAt > 5:289598/1‑148 (MQ=255) ctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAAt < 3:153144/147‑1 (MQ=255) gACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCACATCGCCGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATAAGc > 5:262770/1‑149 (MQ=255) cTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTc < 1:345661/149‑1 (MQ=255) tGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAAt < 4:189963/140‑1 (MQ=255) tGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAAt > 3:189963/1‑140 (MQ=255) gAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCAt < 3:122093/148‑1 (MQ=255) gAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCAt < 2:199820/148‑1 (MQ=255) gAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATc < 6:92239/149‑1 (MQ=255) gTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATGAGCCGTCATCGCTTTCCCt > 5:355656/1‑148 (MQ=255) gTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCt > 3:214870/1‑148 (MQ=255) tGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGa < 5:123964/149‑1 (MQ=255) ggCGTAGCGAGTCGCTGAGGAAGCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCGTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCAGAGGTTGCGTTGGTCGACACCAAATGATACCAATCAGCCTTCATCGCTTTCCCTGAGt < 6:196574/149‑1 (MQ=255) aGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATgcgcgc < 2:37195/149‑1 (MQ=255) gAGGACTCAACAGCCGGCGTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCTCCAcc < 8:119664/149‑1 (MQ=255) cTCAACAGCCGGCTTGAAGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGaa < 3:319066/149‑1 (MQ=255) tCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCa > 6:71810/1‑112 (MQ=255) tCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGGCGACACCAATTGATACCAATCAGCCTTCa < 5:71810/112‑1 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCCCGCCACCGTGAAttt > 2:1902/1‑149 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCATCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCCTTGGTCGACGCCAATTGAAACCAATCAGCCTTCATCCATTTCCCTGAGGTACAATGCGCGCCACCGTGAAttt > 5:7638/1‑149 (MQ=255) aCAGCCGGCGTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTg < 6:262770/149‑1 (MQ=255) cAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGTC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGc < 6:309918/149‑1 (MQ=255) cGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTACCTGAGTTACAATGCGCGCCACCGTGAATTTGCCaa > 7:145195/1‑148 (MQ=255) gCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAg < 7:108907/149‑1 (MQ=255) gCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAg > 2:122166/1‑149 (MQ=255) atgatgGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTgc < 1:1902/148‑1 (MQ=255) gttgGCTTGCCTGTACCGGCCTCTTCGCGTCTAAATCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTgcgc < 8:145195/146‑1 (MQ=255) gatgGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTgcgc > 7:41109/1‑148 (MQ=255) ggCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCa > 3:218174/1‑121 (MQ=255) ggCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCa < 4:218174/121‑1 (MQ=255) ggCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATg > 5:121185/1‑149 (MQ=255) gCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACGATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATg > 5:388413/1‑148 (MQ=255) gCTTGCCTGTACCGGCCTCTTCCCGGCTAAAGCCG‑GAAGAGGC‑CGGCTCAGGTTGCGTTGGTCGACGCCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATg < 6:7638/148‑1 (MQ=255) cTTGCCTGTACCGGCCTCTTCGAGGATAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTTGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCTCCACCGTGAATTTGCCAACAGGTGCGCCATGc < 6:289598/148‑1 (MQ=255) ttGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAg > 1:60689/1‑149 (MQ=255) ttGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAg > 7:318441/1‑149 (MQ=255) tACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACg < 6:121185/149‑1 (MQ=255) cGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGcc < 5:146814/141‑1 (MQ=255) cGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGcc > 6:146814/1‑141 (MQ=255) cGGCCTCTTC‑CGGCTTTAGCCGCGAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTa > 5:356738/1‑149 (MQ=39) gCCTCTTC‑CGGCTTTAGCCGCGAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTAc > 3:288327/1‑95 (MQ=37) gCCTCTTC‑CGGCTTTAGCCGCGAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTAc < 4:288327/95‑1 (MQ=37) ccTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTg < 4:214870/149‑1 (MQ=255) tcttccgGCTTTAGCCGCGAAGAGGC‑CGGTACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcc > 8:35825/6‑149 (MQ=39) ttCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGa < 4:283064/85‑1 (MQ=255) ttCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGa > 3:283064/1‑85 (MQ=255) ttCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcc < 8:41109/147‑1 (MQ=255) ccgGCTTTAGCCGCGAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTAtt > 4:100845/2‑142 (MQ=255) ccgGCTTTAGCCGCGAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTAtt < 3:100845/141‑1 (MQ=255) cgGCTTTAGCCGCGAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTc < 6:356738/149‑1 (MQ=255) aaGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCCGCCCTACGCTATTGCCCCCTCCATtctc > 8:53216/1‑149 (MQ=255) ccG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGACAACAGTTGCGCCTTGCAGCCCTACGCTATGGCCCCCTACATTctctct > 8:357039/1‑149 (MQ=255) | ATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCG‑GAAGAGGC‑CGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCATTCTCTCT > NC_002947/503690‑503983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |