| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 85981 = | 55 (0.890) | 4 (0.070) | 4/252 | NT | 7.3% | coding (737/1566 nt) | PP_0075 | choline sulfate transporter |
| ? | NC_002947 | 86023 = | 50 (0.850) | coding (695/1566 nt) | PP_0075 | choline sulfate transporter | |||||
CGGCCTTCAAACTCTGGCGCCCACGCTGGCCGAGCCTGTTGATAAGCCTGATCCTGGTCAGCTTGCTGGCCTGGCTGCTGCCGGGCTTCTTTGGCCATGTACCGCGGGTGGCAGCGTTCACCGGGCAACTCCCGCCTTTCAGCCCGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/86131‑85981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgccACCCGCGGTACATGGCCAAAGAAGCCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAGGCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCA > NC_002947/86023‑86164 CGGCCTTCAAACTCTGGCGCCCACGCTGGCCGAGCCTGTTGATAAGCCTGATCCTGGTCAGCTTGCTGGCCTGGCTGCTGCCGGGCTTCTTTGGCCATGTACCGCGGGTGGCAGCGTTCACCGGGCAACTCCCGCCTTTCAGCCCGCTG < 6:128385/149‑1 GGGTGGCAGCGTTCACCGGGCAACTCCCGCCTTTCAGCCCGCTGCCACCCGCGGTACATGGCCAAAGAAGCCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAGGCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTG > 6:171176/1‑148 GGTGGCAGCGTTCACCGGGCAACTCCCGCCTTTCAGCCCGCTGCCACCCGCGGTACATGGCCAAAGAAGCCCGGCAGCAGCCAGGCCA > 5:280620/1‑88 GGTGGCAGCGTTCACCGGGCAACTCCCGCCTTTCAGCCCGCTGCCACCCGCGGTACATGGCCAAAGAAGCCCGGCAGCAGCCAGGCCA < 6:280620/88‑1 GGCAGCGTTCACCGGGCAACTCCCGCCTTTCAGCCCGCTGCCACCCGCGGTACATGGCCAAAGAAGCCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAGGCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGC > 8:228200/1‑149 CGCTGCCACCCGCGGTACATGGCCAAAGAAGCCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAGGCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCA < 3:366205/149‑1 CGGCCTTCAAACTCTGGCGCCCACGCTGGCCGAGCCTGTTGATAAGCCTGATCCTGGTCAGCTTGCTGGCCTGGCTGCTGCCGGGCTTCTTTGGCCATGTACCGCGGGTGGCAGCGTTCACCGGGCAACTCCCGCCTTTCAGCCCGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/86131‑85981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgccACCCGCGGTACATGGCCAAAGAAGCCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAGGCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCA > NC_002947/86023‑86164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |