New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	189395 =	67 (1.080)	4 (0.070)	4/256	NT	5.7%	coding (1504/1947 nt)	PP_0165	GGDEF domain‑containing protein
	?	NC_002947	189474 =	69 (1.160)					coding (1583/1947 nt)	PP_0165	GGDEF domain‑containing protein

CCATGCAGGCGCCGGGTGAGTTGCTCCAACGCTGCCTGCTCAGGCAACTGCTCCTCGCCAATTTCAAAAACCAGCCGCGGACCGAGCGCCGCATTCTGGCCCAGCAGCTCGAAAACGCGCTGAAGGGCCTTGGGGTCGGCCAGGGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/189546‑189395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGG  >  NC_002947/189474‑189617                                                                                                                                                                                                                                                                                                          CCATGCAGGCGACGCGTGAGTAGCTCCAACGCTGCCTGCTCAGGCAACTGCTCCTCGCCAATTTCAAAAACCAGCCGCGCACCGACCGCCGCAATCTGCCCCAGCAGCTCGAACACGCGCTGAAGGGCCTTGGGGTCGGCCAGGCTGGC                                                                                                                                                     >  4:85953/1‑149                                                                    AAACCAGCAGCGGACCGAGCGCCGCATTCTGGCCCAGCAGCTCGAAAACGCGCTGAAGGGCCTTGGGGTCGGCCAGGGTGGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCG                                                                                  >  2:176425/1‑149                                                                        CAGCCGCGGACCGAGCGCCGCATTCTGGCCCAGCAGCTCGAAAACGCGCTGAAGGGCCTTGGGGTCGGCCAGGGTGGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTG                                                                              >  3:106034/1‑149                                                                                                                 AAACGCGCTGAAGGGCCTTGGGGTCGGCCAGGGTGGCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGG                                     <  4:106034/149‑1                                                                                                                                 CTTGGGGTCGGCCAGGGTGGCGGCTGGTTTTTGAAATTGGCGACGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATT                     <  1:176425/149‑1                                                                                                                                                    GCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGG  <  3:166864/149‑1                                                                                                                                                    GCGGCTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGG  <  7:162851/149‑1                                                                                                                                                                                                                                                                                                          CCATGCAGGCGCCGGGTGAGTTGCTCCAACGCTGCCTGCTCAGGCAACTGCTCCTCGCCAATTTCAAAAACCAGCCGCGGACCGAGCGCCGCATTCTGGCCCAGCAGCTCGAAAACGCGCTGAAGGGCCTTGGGGTCGGCCAGGGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/189546‑189395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcTGGTTTTTGAAATTGGCGAGGAGCAGTTGCCTGAGCAGGCAGCGTTGGAGCAACTCACCCGGCGCCTGCATGGGCTTGGCTTCGGGTTGGCTTTGCAACGCTTCGGTGGGCGCTTCAGCATGATTGGCAACCTGGCGCATTTGG  >  NC_002947/189474‑189617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.