New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 238035 = | 55 (0.890) | 3 (0.050) | 3/250 | NT | 5.9% | coding (54/942 nt) | hemC | porphobilinogen deaminase |
? | NC_002947 | 238085 = | 44 (0.760) | coding (104/942 nt) | hemC | porphobilinogen deaminase |
GGTTTCCAGTTCCTTGACGAACAGCCCCTTGCCGCCGATTTTTGCCAGCGGCGCGTCGAGCAACTTGTCACCGCGACTGACCATGGGTACCAGGGTCACCTGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/238185‑238035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctgcAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGACAACGAAGCCGACATCGCCGTGCACTCGATGAAA > NC_002947/238085‑238230 GGTTTCCAGTTCCTTGACGAACAGCCCCTTGCCGCCGATTTTTGCCAGCGGCGCGTCGAGCAACTTGTCACCGCGACTGACCATGGGTACCAGGGTCACCTGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCT < 6:37374/149‑1 TTTCCAGTTCCTTGACGAACAGCCCCTTGCCGCCGATTTTTGCCAGCGGCGCGTCGAGCAACTAGTCACCGCGACTGAACATGGGTACCAGGGTCACCTGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGC > 7:245529/1‑149 TGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGCAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTG < 1:137533/146‑1 TGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGCAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTG > 2:137533/1‑146 GCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGCAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAA > 5:216250/1‑149 CGGCGTGCTGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGAGAACGAAGCCGACATCGCCGTGCACTCGA < 1:179090/149‑1 CAGGTGAACCTGGTACCCATGGTCAGTCGAGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGACAACGAAGCCGACATCGCCGTGCACTCGATGAAA < 3:254823/147‑1 GGTTTCCAGTTCCTTGACGAACAGCCCCTTGCCGCCGATTTTTGCCAGCGGCGCGTCGAGCAACTTGTCACCGCGACTGACCATGGGTACCAGGGTCACCTGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/238185‑238035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctgcAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGACAACGAAGCCGACATCGCCGTGCACTCGATGAAA > NC_002947/238085‑238230 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |