New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 238035 =55 (0.890)3 (0.050) 3/250 NT 5.9% coding (54/942 nt) hemC porphobilinogen deaminase
?NC_002947 238085 = 44 (0.760)coding (104/942 nt) hemC porphobilinogen deaminase

GGTTTCCAGTTCCTTGACGAACAGCCCCTTGCCGCCGATTTTTGCCAGCGGCGCGTCGAGCAACTTGTCACCGCGACTGACCATGGGTACCAGGGTCACCTGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/238185‑238035
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctgcAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGACAACGAAGCCGACATCGCCGTGCACTCGATGAAA  >  NC_002947/238085‑238230
                                                                                                                                                                                                                                                                                                         
GGTTTCCAGTTCCTTGACGAACAGCCCCTTGCCGCCGATTTTTGCCAGCGGCGCGTCGAGCAACTTGTCACCGCGACTGACCATGGGTACCAGGGTCACCTGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCT                                                                                                                                                      <  6:37374/149‑1
  TTTCCAGTTCCTTGACGAACAGCCCCTTGCCGCCGATTTTTGCCAGCGGCGCGTCGAGCAACTAGTCACCGCGACTGAACATGGGTACCAGGGTCACCTGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGC                                                                                                                                                    >  7:245529/1‑149
                                                                                                    TGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGCAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTG                                                     <  1:137533/146‑1
                                                                                                    TGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGCAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTG                                                     >  2:137533/1‑146
                                                                                                     GCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGCAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAA                                                 >  5:216250/1‑149
                                                                                                                                               CGGCGTGCTGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGAGAACGAAGCCGACATCGCCGTGCACTCGA       <  1:179090/149‑1
                                                                                                                                                      CAGGTGAACCTGGTACCCATGGTCAGTCGAGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGACAACGAAGCCGACATCGCCGTGCACTCGATGAAA  <  3:254823/147‑1
                                                                                                                                                                                                                                                                                                         
GGTTTCCAGTTCCTTGACGAACAGCCCCTTGCCGCCGATTTTTGCCAGCGGCGCGTCGAGCAACTTGTCACCGCGACTGACCATGGGTACCAGGGTCACCTGCAGGCCGGTGTGGGCCTGCTCGAGGCGGGCCTTGACGTATTCGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/238185‑238035
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctgcAGGTGACCCTGGTACCCATGGTCAGTCGCGGTGACAAGTTGCTCGACGCGCCGCTGGCAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGCTGGACAACGAAGCCGACATCGCCGTGCACTCGATGAAA  >  NC_002947/238085‑238230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.