| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 507023 | 72 (1.160) | 7 (0.130) | 5/238 | NT | 10.5% | intergenic (+35/+98) | trpE/estP | anthranilate synthase component 1/esterase EstP |
| ? | NC_002947 | = 507085 | 55 (0.990) | intergenic (+97/+36) | trpE/estP | anthranilate synthase component 1/esterase EstP | |||||
CATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/506863‑507023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccattcgcgggtGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCTGCGCAGCAGCCCCAATCAATTTATCTGGCGGAAGTCTGCTCGGCCAACGCCACCGCACGGAACATC < NC_002947/507085‑506943 CATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGC < 7:76501/149‑1 TGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCC < 4:338280/149‑1 GTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCA > 2:367186/1‑149 GCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGCGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCG > 8:129020/1‑149 GCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCG > 1:260309/1‑149 CCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAGTGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGG < 2:292147/149‑1 CCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGATTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGG < 1:85084/149‑1 CCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGG < 8:226994/149‑1 GGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGT < 5:138394/149‑1 GGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGT < 7:111737/149‑1 GTTGCCTACTCGGTGCCGGCGCTGGAATGGCAAGAAACCATCAACAAGCGCCGGGCTATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGTTTACCCGCgaat < 3:132954/149‑5 TTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGTTTACCCGCgaatg < 6:242737/149‑6 TCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCC > 4:21085/1‑149 AAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGC > 3:12817/1‑91 AAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGC < 4:12817/91‑1 CAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGC < 1:14912/149‑1 TTCCGTGCGGTGGCGGTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAAT < 3:21085/149‑1 GTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGT > 4:183308/1‑123 GTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGT < 3:183308/123‑1 GCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCTGCGCAGCAGCCCCAATCAATTTATCTGGCGGAAGTCTGCTCGGCCAACGCCACCGCACGGAACATC < 8:40436/149‑1 CATGTGCAGGCCGGTGGCGGCATCGTTGCCGACTCGGTGCCGGCGCTGGAATGGGAAGAAACCATCAACAAGCGCCGGGCGATGTTCCGTGCGGTGGCGTTGGCCGAGCAGACTTCCGCCAGATAAATTGATTGGGGCTGCTGCGCAGCCCATTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/506863‑507023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccattcgcgggtGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCTGCGCAGCAGCCCCAATCAATTTATCTGGCGGAAGTCTGCTCGGCCAACGCCACCGCACGGAACATC < NC_002947/507085‑506943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |