New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	595165 =	69 (1.110)	4 (0.070)	4/260	NT	5.8%	coding (989/1266 nt)	PP_0506	ABC transporter permease
	?	NC_002947	595214 =	63 (1.040)					coding (940/1266 nt)	PP_0506	ABC transporter permease

AACTGTGGAGCCTGATGGGCACTGCGGAACAGGCATTGTTCGTGGTGTCGCTATTCGTGGTGCTGACCGGTTTGATCGGCATGCTCACGGCGATTCTCACCAGCCTCAACGAACGCCGCCGGGAAATGGCGATCTTGCGTTCGGTCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/595315‑595165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTGGTGAGAATCGCCGTGAGCATGCCGATCAAACCGGTCAGCACCACGAATAGCGACACCACGAACAATGCCTGTTCCGCAGTGCCCATCAGGCTCCACAGTTCCTG  >  NC_002947/595214‑595319                                                                                                                                                                                                                                                                   AACTGTGGAGCCTGATGGGCACTGCGGAACAGGCATTGTTCGTGGTGTCGCTATTCGTGGTGCTGACCGGTTTGATCGGCATGCTCACGGCGATTCTCACCAGCCTCAACGAACGCCGCCGGGAAATGGCGATCTTGCGTTCGGTCGGG                                                                                                              <  3:2745/149‑1                                                                                                  CACCAGCCTCAACGAACGCCGCCGGGAAATGGCGATCTTGCGTTCGGTCGGGGCTGGTGAGAATCGCCGTGAGCATGCCGATCAAACCGGTCAGCACCACGAATAGCGACACCACGAACAATGCCTGTTCCGCAGTGCCCATCAGGCTC             >  4:157981/1‑149                                                                                                   ACCAGCCTCAACGAACGCCGCCGGGAAATGGCGATCTTGCGTTCGGTCGGGGCTGGTGAGAATCGCCGTGAGCATGCCGATCAAACCGGTCAGCACCACGAATAGCGACACCACGAACAATGCCTGTTCCGCAGTGCCCATCAGGCTC             >  4:45732/1‑148                                                                                                      AGCCTCAACGAACGCCGCCGGGAAATGGCGATCTTGCGTTCGGTCGGGGCTGGTGAGAATCGCCGTGAGCATGCCGATCAAACCGGTCAGCACCACGAATAGCGACACCACGAACAATGCCTGTTCCGCAGTGCCCATCAGGCTCCACA         <  3:157981/149‑1                                                                                                            AACGAACGCCGCCGGGAAATGGCGATCTTGCGTTC‑GTTGAGGCTGGTGAGAATCGCCGTGAGCATGCCGATCAAACCGGTCAGCACCACGAATAGCGACACCACGAACAATGCCTGTTCCGCAGTGCCCATCAGGCTCCACAGTTCCTG  >  3:296318/1‑149                                                                                                                                                                                                                                                                   AACTGTGGAGCCTGATGGGCACTGCGGAACAGGCATTGTTCGTGGTGTCGCTATTCGTGGTGCTGACCGGTTTGATCGGCATGCTCACGGCGATTCTCACCAGCCTCAACGAACGCCGCCGGGAAATGGCGATCTTGCGTTCGGTCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/595315‑595165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTGGTGAGAATCGCCGTGAGCATGCCGATCAAACCGGTCAGCACCACGAATAGCGACACCACGAACAATGCCTGTTCCGCAGTGCCCATCAGGCTCCACAGTTCCTG  >  NC_002947/595214‑595319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.