New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	599803 =	63 (1.020)	4 (0.070)	4/246	NT	6.5%	coding (241/408 nt)	PP_0512	hypothetical protein
	?	NC_002947	599853 =	57 (0.990)					coding (191/408 nt)	PP_0512	hypothetical protein

GCCCGTTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/599958‑599803 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgctgcGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCGCGGGCGCCG  >  NC_002947/599853‑600000                                                                                                                                                                                                                                                                                                                  GCCCGTTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCGCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAG                                                                                                                                                             <  4:129352/149‑1  CCCGTTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGG                                                                                                                                                            <  8:209471/149‑1   CCGTTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGC                                                                                                                                                           <  3:232990/149‑1      TTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCT                                                                                                                                                        <  2:114878/149‑1        GCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCTGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGC                                                                                                                                                      >  6:337550/1‑149                                                                                                         CCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCG                                                     >  1:119908/1‑149                                                                                                          CGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGG                                                    <  2:119908/149‑1                                                                                                               CGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACG                                               >  1:189131/1‑149                                                                                                                        GCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGG                                        <  2:189131/147‑1                                                                                                                                                   CAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCG           >  2:263670/1‑149                                                                                                                                                   CAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCG           >  2:28989/1‑149                                                                                                                                                   CAGGCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCG           <  3:109015/149‑1                                                                                                                                                      GCGCTGCGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGACGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCGCGG        <  2:122547/149‑1                                                                                                                                                            CGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCGCGGGCGCCG  >  2:152085/1‑149                                                                                                                                                                                                                                                                                                                  GCCCGTTGCCGGCCTACCAGCGCGAGCTGAGCGGCACCTTGCTGGAAATCCCGGCGGGTGCCGAGGTGGAACTGGCCTTGCTGGTGATCGACGAACGCGACCGCCCGCAGCGCCTGCTGGCCAGCAGCAACCTGACCGGTACCGGCCAGGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/599958‑599803 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgctgcGGGCGGTCGCGTTCGTCGATCACCAGCAAGGCCAGTTCCACCTCGGCACCCGCCGGGATTTCCAGCAAGGTGCCGCTCAGCTCGCGCTGGTAGGCCGGCAACGGGCCCGGTACTTCGGCCTTGGCCGAGGGGGCTGGCGCGGGCGCCG  >  NC_002947/599853‑600000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.