New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 637804 = | 47 (0.760) | 6 (0.100) | 5/250 | NT | 11.4% | coding (56/288 nt) | PP_0549 | lipoprotein |
? | NC_002947 | 637842 = | 49 (0.840) | coding (94/288 nt) | PP_0549 | lipoprotein |
ACATGCTCCCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/637959‑637804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaccgGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGTCTT > NC_002947/637842‑637989 ACATGCTCCCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTG < 7:296248/149‑1 GCTCCCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCA > 3:354324/1‑149 ACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGG > 7:183262/1‑149 CCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGG > 5:291221/1‑149 CCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGA < 7:299369/116‑1 CCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGA > 8:299369/1‑116 TTGGCATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATA < 8:183262/149‑1 CATCCAGCGTGCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCT < 6:291221/149‑1 GCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCG > 2:75717/1‑149 GCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATC > 5:149903/1‑111 GCGCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATC < 6:149903/111‑1 GCACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTT < 4:110299/149‑1 ACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGT < 2:117916/149‑1 ACCGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGT > 3:306646/1‑149 CGGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGTCT > 8:90177/1‑149 GGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGTCTT < 3:298736/149‑1 ACATGCTCCCCGGCAGATCCAGGCGCGGATACGCCGGAGCGTCCGCCCCGTAATGATCCCGTGGGCAACACCCGCCATTGATCACATACAAATCCAGCCGGGTACCGGCATACACCACCGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/637959‑637804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaccgGTGGTGTATGCCGGTACCCGGCTGGATTTGTATGTGATCAATGGCGGGTGTTGCCCACGGGATCATTACGGGGCGGACGCTCCGGCGTATCCGCGCCTGGATCTGCCGGGGAGCATGTTGCTTGATACCCTGCTGCTGCCGTTGTCTT > NC_002947/637842‑637989 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |