New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 637811	46 (0.740)	3 (0.050)	3/250	NT	6.1%	coding (63/288 nt)	PP_0549	lipoprotein
	?	NC_002947	= 637833	49 (0.840)					coding (85/288 nt)	PP_0549	lipoprotein

CGACTTTGTCGTGGCGCGTATCCTCAACCTGCTGAACATCCCCCAGGATATGTTGCCGCGTTGGGGCGAGCACCACTTCGGGGTGGATGATTGAAACGAGCACTGGCGGGGTTGCTGGCGCTGGTGATGCTGGGTGGCTGCGCCACGGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/637659‑637811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgcgcCGGGCTTGTTGGCATCCAGCGTGCGCACCGTGGCGCAGCCACCCAGCATCACCAGCGCCAGCAACCCCGCCAGTGCTCGTTTCAATCATCCACCCCGAAGTGGTGCTCGCCCCAACGCGGCAACATATCCTGGGGGATGTTCAGCAGG  <  NC_002947/637833‑637686                                                                                                                                                                                                                                                                                                               CGACTTTGTCGTGGCGCGTATCCTCAACCTGCTGAACATCCCCCAGGATATGTTGCCGCGTTGGGGCGAGCACCACTTCGGGGTGGATGATTGAAACGAGCACTGGCGGGGTTGCTGGCGCTGGTGATGCTGGGTGGCTGCGCCACG                                                                                                                                                            >  6:394435/1‑147    CTTTGTCGTGGCGCGTATCCTCAACCTGCTGAACATCCCCCAGGATATGATGCCGCGTTGGGGCGAGCACCACTTCGGGGTGGATGATTGAAACGAGCACTGGCGGGGTTGCTGGCGCTGGTGATGCTGGGTGGCTGCGCCACGGTGCG                                                                                                                                                       <  2:346745/149‑1                                    ACATCCCCCAGGATATGTTGCCGCGGTGGGGCGAGCACCACTTCGGGGTGGATGATTGAAACGAGCACTGGCGGGGTTGCTGGCGCGGGTGATGCTGGGTGGCTGCGCCACGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGT                                                                                                                       <  6:292526/149‑1                                                                          CACTTCGGGGTGGATGATTGAAACGAGCACTGGCGGGGTTGCTGGCGCTGGTGATGCTGGGTGGCTGCGCCACGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGTG                                                                                                                      <  1:325301/112‑1                                                                          CACTTCGGGGTGGATGATTGAAACGAGCACTGGCGGGGTTGCTGGCGCTGGTGATGCTGGGTGGCTGCGCCACGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGTG                                                                                                                      >  2:325301/1‑112                                                                                                                                                  CGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGTGGCGCAGCCACCCAGCATCACCAGCGCCAGCAGCCCCGCCAGTGCTCGTTTCAATCATCCACCCCGAAGTGGTGCTCGCCCCAACGCGGCAACATATCCTGGGGGATGTT         <  2:6968/149‑1                                                                                                                                                  CGGTGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGTGGCGCAGCCACCCAGCATCACCAGCGCCAGCAACCCCGCCAGTGCTCGTATCAATCATCCACCCCGAAGTGGTGCTCGCCCAAACGCGGCAACAATTCCTGGGGGATGTg         >  8:361007/1‑148                                                                                                                                                     TGCGCCGGGCTTGTTGGCATCCAGCGTGCGCACCGTGGCGCAGCCACCCAGCATCACCAGCGCCAGCAACCCCGCCAGTGCTCGTTTCAATCATCCACCCCGAAGTGGTGCTCGCCCCAACGCGGCAACATATCCTGGGGGATGTTCAG      <  4:202032/149‑1                                                                                                                                                        GCCGGGCTTGTTGGCATCCAGCGGGCGCACCGTGGCGCAGCCACCCAGCATCACCAGCGCCAGCAACCCCGCCAGTGCTCGTTTCAATCATCCACCCCGAAGTGGTGCTCGCCCCAACGCGGCAACATATCCTGGGGGATGTTCAGCAG   <  3:110299/149‑1                                                                                                                                                         CCGGGCTTGTTGGCATCCAGCGTGCGCACCGTGGCGCAGCCACCCAGCATCACCAGCGCCAGCAACCCCGCCAGTGCTCGTTTCAATCATCCACCCCGAAGTGGTGCTCGCCCCAACGCGGCAACATATCCTGGGGGATGTTCAGCAGG  <  3:323546/149‑1                                                                                                                                                                                                                                                                                                               CGACTTTGTCGTGGCGCGTATCCTCAACCTGCTGAACATCCCCCAGGATATGTTGCCGCGTTGGGGCGAGCACCACTTCGGGGTGGATGATTGAAACGAGCACTGGCGGGGTTGCTGGCGCTGGTGATGCTGGGTGGCTGCGCCACGGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/637659‑637811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgcgcCGGGCTTGTTGGCATCCAGCGTGCGCACCGTGGCGCAGCCACCCAGCATCACCAGCGCCAGCAACCCCGCCAGTGCTCGTTTCAATCATCCACCCCGAAGTGGTGCTCGCCCCAACGCGGCAACATATCCTGGGGGATGTTCAGCAGG  <  NC_002947/637833‑637686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.