| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 643655 = | 68 (1.100) | 4 (0.070) | 4/254 | NT | 5.6% | coding (351/1023 nt) | acoB | acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit beta |
| ? | NC_002947 | 643685 = | 69 (1.170) | coding (321/1023 nt) | acoB | acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit beta | |||||
CGCTGTCGGAAATCGGCTACGTCGGCGCGGCCGTCGGTGCTGCCACCCAGGGCCTGCGCCCGGTGTGCGAACTGATGTTCGTCGACTTCGCCGGCTGCTGCCTGGACCAGATCCTCAACCAGGCCGCCAAGTTCCGCTACATGTTCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/643806‑643655‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAACATCAGTTCGCACACCGGGCGCAGGCCCTGGGTGGCAGCACCGACGGCCGCGCCGACGTAGCCGATTTCCGACAGCGGCGCGTCAAGCACGCGGCCGGGGAAT > NC_002947/643685‑643832 CGCTGTCGGAAATCGGCTACGTCGGCGCGGCCGTCGGTGCTGCCACCCAGGGCCTGCGCCCGGTGTGCGAACTGATGTTCGTCGACTTCGCCGGCTGCTGCCTGGACCAGATCCTCAACCAGGCCGCCAAGTTCCGCTACATGTTCGGC < 1:235579/149‑1 GCTGTCGGAAATCGGCTACGTCGGCGCGGCCGTCGGTGCTGCCACCCAGGGCCTGCGCCCGGTGTGCGAACTGATGTTCGTCGACTTCGCCGGCTGCTGCCTGGACCAGATCCTCAACCAGGCCGCCAAGTTCCGCTACATGTTCGGCG < 6:376640/149‑1 GCTGTCGGAAATCGGCTACGTCGGCGCGGCCGTCGGTGCTGCCACCCAGGGCCTGCGCCCGGTGTGCGAACTGATGTTCGTCGACTTCGCCGGCTGCTGCCTGGACCAGATCCTCAACCAGGCCGCCAAGTTCCGCTACATGTTCGGCG < 8:181204/149‑1 TCGGAAATCGGCTACGTCGGCGCGGCCGTCGGTGCTGCCACCCAGGGCCTGCGCCCGGTGTGCGAACTGATGTTCGTCGACTTCGCCGGCTGCTGCCTGGACCAGATCCTCAACCAGGCCGCCAAGTTCCGCTACATGTTCGGCGGC > 3:26653/1‑147 TCGGAAATCGGCTACGTCGGCGCGGCCGTCGGTGCTGCCACCCAGGGCCTGCGCCCGGTGTGCGAACTGATGTTCGTCGACTTCGCCGGCTGCTGCCTGGACCAGATCCTCAACCAGGCCGCCAAGTTCCGCTACATGTTCGGCGGC < 5:324673/147‑1 ACCAGGCCGCCAAGTTCCGCTACATGTTCGGCGGCCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAACATCAGTTCGCACACCGGGCGCAGGCCCTGGGTGGCAGCACCGACGGC > 7:87286/1‑128 ACCAGGCCGCCAAGTTCCGCTACATGTTCGGCGGCCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAACATCAGTTCGCACACCGGGCGCAGGCCCTGGGTGGCAGCACCGACGGC < 8:87286/128‑1 CCAGGCCGCCAAGTTCCGCTACATGTTCGGCGGCCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAA < 3:60783/79‑1 CCAGGCCGCCAAGTTCCGCTACATGTTCGGCGGCCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAA > 4:60783/1‑79 GGCGGCCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAACATCAGTTCGCACACCGGGCGCAGGCCCTGGGTGGCAGCACCGACGGCCGCGCCGACGTAGCCGATTTCCGACAGCGGCGCGTCAAGCACGCGGCCGG > 2:49412/1‑149 CGGCCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAACATCAGTTCGCACACCGGGCGCAGGCCCTGGGTGGCAGCACCGACGGCCGCGCCGACGTAGCCGATTTCCGACAGCGGCGCGTCAAGCACGCGGCCGGGG < 5:376640/149‑1 CCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAACATCAGTTCGCACACCGGGCGCAGGCCCTGGGTGGCAGCACCGACGGCCGCGCCGACGTAGCCGATTTCCGACAGCGGCGCGTCAAGCACGCGGCCGctgtcg < 1:2367/149‑7 CCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAACATCAGTTCGCACACCGGGCGCAGGCCCTGGGTGGCAGCACCGACGGCCGCGCCGACGTAGCCGATTTCCGACAGCGGCGCGTCAAGCACGCGGCCGctgtcg > 2:2367/1‑143 CGCTGTCGGAAATCGGCTACGTCGGCGCGGCCGTCGGTGCTGCCACCCAGGGCCTGCGCCCGGTGTGCGAACTGATGTTCGTCGACTTCGCCGGCTGCTGCCTGGACCAGATCCTCAACCAGGCCGCCAAGTTCCGCTACATGTTCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/643806‑643655‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcCTGGTTGAGGATCTGGTCCAGGCAGCAGCCGGCGAAGTCGACGAACATCAGTTCGCACACCGGGCGCAGGCCCTGGGTGGCAGCACCGACGGCCGCGCCGACGTAGCCGATTTCCGACAGCGGCGCGTCAAGCACGCGGCCGGGGAAT > NC_002947/643685‑643832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |