| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 647464 | 67 (1.080) | 5 (0.090) | 5/252 | NT | 7.3% | coding (1087/1854 nt) | acoR | acetoin catabolism regulatory protein |
| ? | NC_002947 | = 647486 | 64 (1.090) | coding (1109/1854 nt) | acoR | acetoin catabolism regulatory protein | |||||
CCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGGGCCGGCAAGGAGGTATTCGCCCGCCAGTTGCACCAGCAAAGCCAGCGCTGTGATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/647343‑647464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggccGCGCAGTTCAGGGTAACGAACGGGCCATCACAGCGCTGGCTTTGCTGGTGCAACTGGCGGGCGAATACCTCCTTGCCGGCCCCGGTCTCACCCAGTACCAGCACCGCCAGGTTGCAGTCCTTGACC < NC_002947/647486‑647361 CCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGGGCCGGCAAGGAGGTATTCGCCCGCCAGTTGCACCAGCAAAGCCAGCGCTGTGATGGCCGCGCAGTTCAGGGTAACGAACGGGCCA > 2:162936/1‑149 GGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGGGCCGGCAAGGAGGTATTCGCCCGCCAGTTGCACCAGCAAAGCCAGCGCTGTGATGGCCGCGCAGTTCAGGGTAACGAACGGGCCATCACA < 1:162936/149‑1 CACGCGGGTCAAGGACTGCAACCTGGCGGGGCTGGTACTGGGGGAGACCGGGGCCGGCAAGGAGGTATTCGCCCGCCAGTTGCACCAGCAAAGCCAGCGCTGGGATGGCCGCGCAGTTCAGGGTAACGAACGGGCCATCACAGCGCTGG < 6:325649/149‑1 CGCCCGCCAGTTGCACCAGCAAAGCCAGCGCTGTGATGGCCGCGCAGTTCAGGGTAACGAACGGG > 5:386067/1‑65 CGCCCGCCAGTTGCACCAGCAAAGCCAGCGCTGTGATGGCCGCGCAGTTCAGGGTAACGAACGGG < 6:386067/65‑1 CCGCGCAGTTCAGGGTAACGAACGGGCCATCACAGCGCTGGCTTTGCTGGTGCAACTGGCGGGCGAATACCTCCTTGCCGGCCCCGGTCTCACCCAGTACCAGCACCGCCAGGTTGCAGTCCTTGACC < 5:372851/128‑1 CCGCGCAGTTCAGGGTAACGAACGGGCCATCACAGCGCTGGCTTTGCTGGTGCAACTGGCGGGCGAATACCTCCTTGCCGGCCCCGGTCTCACCCAGTACCAGCACCGCCAGGTTGCAGTCCTTGACC > 6:372851/1‑128 CCTGCGGTTGGCCACGCGGGTCAAGGACTGCAACCTGGCGGTGCTGGTACTGGGTGAGACCGGGGCCGGCAAGGAGGTATTCGCCCGCCAGTTGCACCAGCAAAGCCAGCGCTGTGATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/647343‑647464‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggccGCGCAGTTCAGGGTAACGAACGGGCCATCACAGCGCTGGCTTTGCTGGTGCAACTGGCGGGCGAATACCTCCTTGCCGGCCCCGGTCTCACCCAGTACCAGCACCGCCAGGTTGCAGTCCTTGACC < NC_002947/647486‑647361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |