| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 837097 | 58 (0.940) | 4 (0.070) | 3/254 | NT | 6.2% | coding (259/1101 nt) | ychF | ribosome‑associated potassium‑dependent ATP/GTPase |
| ? | NC_002947 | = 837121 | 65 (1.100) | coding (235/1101 nt) | ychF | ribosome‑associated potassium‑dependent ATP/GTPase | |||||
GAGGTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/836945‑837097‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgccGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAAGTTCCTCGCCAACATCCGCGAGACCGACGCCATTGCCCACGTGGTGCGCTGCTTCGAAGACGAGAACGTGATCCACGTTTCCAACAGCGTCGACCCCAAGCGTGACATCGAGATCA < NC_002947/837121‑836974 GAGGTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGT > 2:75673/1‑149GAGGTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGT > 4:126448/1‑149 AGGTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTT < 3:304546/149‑1 AGGTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGCTCTCGCGGATGTTGGCGAGGAACTTGTT < 1:221638/149‑1 GTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGC < 1:75673/149‑1 TCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGCC < 5:67978/149‑1 GGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGCC > 2:324739/1‑147 GATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGCCGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAA < 2:129121/149‑1 ATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTCCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGCCGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAAG < 8:13559/149‑1 ACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGCCGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAA < 3:139767/143‑1 ACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGCCGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAA > 4:139767/1‑143 GTTGCCGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAAGTTCCTCGCCAACATCCGCGAGACCGACGCCATTGCCCACGTGGTGCGCTGCTTCGAAGACGAGAACGTGATCCACGTTTCCAACAGCGTCGACCCCAAGCGTGACATCG < 1:54631/148‑1 GTTGCCGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAAGTTCCTCGCCAACATCCGCGAGACCGACGCCATTGCCCACGTGGTGCGCTGCTTCGAAGACGAGAACGTGATCCACGTTTCCAACAGCGTCGACCCCAAGCGTGACATC > 8:187824/1‑147 TTGCCGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAAGTTCCTCGCCAACATCCGCGAGACCGACGCCATTGCCCACGTGGTGCGCTGCTTCGAAGACGAGAACGTGATCCACGTTTCCAACAGCGTCGACCCCAAGCGTGACATCGAG < 7:350356/149‑1 CGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAAGTTCCTCGCCAACATCCGCGAGACCGACGCCATTGCCCACGTGGTGCGCTGCTTCGAAGACGAGAACGTGATCCACGTTTCCAACAGCGTCGACCCCAAGCGTGACATCGAGATCA > 3:154116/1‑149 GAGGTCGGCGAAGATCAGTTCGAGGTCGATGATCTCGATGTCACGCTTGGGGTCGACGCTGTTGGAAACGTGGATCACGTTCTCGTCTTCGAAGCAGCGCACCACGTGGGCAATGGCGTCGGTCTCGCGGATGTTGGCGAGGAACTTGTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/836945‑837097‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgccGGTGCCTCGAAAGGCGAAGGCCTGGGCAACAAGTTCCTCGCCAACATCCGCGAGACCGACGCCATTGCCCACGTGGTGCGCTGCTTCGAAGACGAGAACGTGATCCACGTTTCCAACAGCGTCGACCCCAAGCGTGACATCGAGATCA < NC_002947/837121‑836974 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |