New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 940684	76 (1.230)	5 (0.080)	5/260	NT	6.4%	coding (4938/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 941940	73 (1.200)					coding (3682/18933 nt)	PP_0806	surface adhesion protein

GCAGCGGCGCAGAGGCGTTGCCGTCAGCATCCACCAAGCGTACGTCGAGGGCTTCGCCGTTGGCCTGGGCAGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCACCGACGACACCAGTACCGATGACAGCACCGCCGGCATCGCGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/940536‑940684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accGGCGTCGTCGGTGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGGCCAATGGTGAAGCACTCGACGTGCGTCTGGTGGATGCCGCCGGCAACAGTTCGATACCGCTGGAGTTCACAGCCCCGGATATCACACCGCCC  <  NC_002947/941940‑941797                                                                                                                                                                                                                                                                                                       GCAGCGGCGCAGAGGCGTTGCCGTCAGCATCCACCAAGCGTACGTCGAGGGCTTCGCCGTTGGCCTGGGCAGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCACCGACGACACCAGTACCGATGACAGCACCGCCGGCATCGCGTAC                                                                                                                                                   <  8:319003/148‑1                       GTCAGCATCCACCAAGCGTACGTCGAGGGCTTCGCCGTTGGCCTGGGCAGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCACCGACGACACCAGTACCGATGACAGCACCGCCGGCATCGCGTAC                                                                                                                                                   >  5:371357/1‑126                       GTCAGCATCCACCAAGCGTACGTCGAGGGCTTCGCCGTTGGCCTGGGCAGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCACCGACGACACCAGTACCGATGACAGCACCGCCGGCATCGCGTAC                                                                                                                                                   <  6:371357/126‑1                                                                                                              GACACCAGTACCGATGACAGCACCGCCGGCATCGCGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAAGCACTCGACGTGCGTCTGGTGGATGCCGCCGGCAACAGTTCGATAC                                     >  1:64255/1‑149                                                                                                                 ACCAGTACCGATGACAGCACCGCCGGCATCGCGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAAGCACTCGACGTGCGTCTGGTGGATGCCGCCGGCAACAGTTCGATACCGC                                  >  5:248926/1‑149                                                                                                                      TACCGATGACAGCACCGCCGGCATCGCGTACTGGTGTCGTCGGTGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCTGCCCAGGCCAACGGCGAAG                                                                                  >  1:217453/1‑96                                                                                                                      TACCGATGACAGCACCGCCGGCATCGCGTACTGGTGTCGTCGGTGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCTGCCCAGGCCAACGGCGAAG                                                                                  <  2:217453/96‑1                                                                                                                        CCGATGACAGCACCGCCGGCATCGCGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAAGCACACGACGTGCGTCTGGTGGATGCCGCCGGCAACAGTTCGATACCGCTGacgta                           >  5:62379/1‑144                                                                                                                                                   ACCGGCGTCGTCGGTGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGGCCAATGGTGAAGCACTCGACGTGCGTCTGGTGGATGCCGCCGGCAACAGTTCGATACCGCTGGAGTTCACAGCCCCGGATATCACACCGCCC  >  2:310139/1‑147                                                                                                                                                   ACCGGCGTCGTCGGTGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGGCCAATGGTGAAGCACTCGACGTGCGTCTGGTGGATGCCGCCGGCAACAGTTCGATACCGCTGGAGTTCACAGCCCCGGATATCACACCGCCC  >  4:13634/1‑147                                                                                                                                                                                                                                                                                                       GCAGCGGCGCAGAGGCGTTGCCGTCAGCATCCACCAAGCGTACGTCGAGGGCTTCGCCGTTGGCCTGGGCAGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCACCGACGACACCAGTACCGATGACAGCACCGCCGGCATCGCGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/940536‑940684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accGGCGTCGTCGGTGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGGCCAATGGTGAAGCACTCGACGTGCGTCTGGTGGATGCCGCCGGCAACAGTTCGATACCGCTGGAGTTCACAGCCCCGGATATCACACCGCCC  <  NC_002947/941940‑941797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.