New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 946955 | 51 (0.820) | 4 (0.070) | 3/252 | NT | 7.4% | coding (414/1557 nt) | norR | DNA‑binding transcriptional regulator |
? | NC_002947 | = 947008 | 52 (0.890) | coding (361/1557 nt) | norR | DNA‑binding transcriptional regulator |
CCTGGCCGCTGGCCTGGCGGTAGAGCTCGGCGCGATGGTGTTCGTCTTCGGCGCGCAGGGCCAGGTGCTCGATACGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAACTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/946801‑946955 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccgTTGATGGTCGATGAGCGCCCATGGGGCCTGGTCACCCTCGACGCCCTCACCCCCGGGCAGTTCCAGAGCCTGGAGCTGGATGCCCTGCAGGCCTTTGCCAGCCTGGCTGCCGCCACCGTTACCGTGGCCGAGCGTATCGAGCACC < NC_002947/947008‑946864 CCTGGCCGCTGGCCTGGCGGTAGAGCTCGGCGCGATGGTGTTCGTCTTCGGCGCGCAGGGCCAGGTGCTCGATACGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAAC > 5:114258/1‑149 GGCCGCTGGCCTGGCGGTAGAGCTCGGCGCGATGGTGTTCGTCTTCGGCGCGCAGGGCCAGGTGCTCGATACGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAACTGC > 1:363509/1‑149 GGCCGCGGGCCTGGCGGTAGAGCTCGGCGCGATGGTGGTCGTCTTCGGCGCGCAGGGCCAGGGGCGCGATACGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAACTGC < 6:327678/149‑1 GTTCGTCTTCGGCGCGCAGGGCCAGGTGCTCGATAAGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAACTGCCCGTTGATGGTCGATGAGCGCCCATGGGGCCTGGT > 7:3737/1‑148 CAGGTGCTCGATACGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAACTGCCCGTTGATGGTCGATGAGCGCCCATGGGGCCTGGTCACCCTCGACGCCCTCACCCCCG > 3:49062/1‑149 GATAGGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAACTGCCCGTTGATGGTCGATGAGCGCCCATGGGGCCTGGTCACCCTCGACGCCCTCACCCCCGGGCAGTTC < 8:3737/148‑1 GATACGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAACTGCCCGTTGATGGTCGATGAGCGCCCATGGGGCCTGGTCACCCTCGACGCCCTCACCCCCGGGCAGTTC < 4:49062/148‑1 CCCGTTGATGGTCGATGAGCGCCCATGGGGCCTGGTCACCCTCGACGCCCTCACCCCCGGGCAGTTCCAGAGCCTGGAGCTGGATGCCCTGCAGGCCTTTGCCAGCCTGGCTGCCGCCACCGTTACCGTGGCCGAGCGTATCGAGCACC > 6:324856/1‑149 CCTGGCCGCTGGCCTGGCGGTAGAGCTCGGCGCGATGGTGTTCGTCTTCGGCGCGCAGGGCCAGGTGCTCGATACGCTCGGCCACGGTAACGGTGGCGGCAGCCAGGCTGGCAAAGGCCTGCAGGGCATCCAGCTCCAGGCTCTGGAACTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/946801‑946955 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccgTTGATGGTCGATGAGCGCCCATGGGGCCTGGTCACCCTCGACGCCCTCACCCCCGGGCAGTTCCAGAGCCTGGAGCTGGATGCCCTGCAGGCCTTTGCCAGCCTGGCTGCCGCCACCGTTACCGTGGCCGAGCGTATCGAGCACC < NC_002947/947008‑946864 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |