New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1049671 =	60 (0.970)	4 (0.070)	4/246	NT	7.3%	intergenic (‑72/+84)	PP_0907/PP_0908	RND transporter membrane fusion protein‑like protein/hypothetical protein
	?	NC_002947	1049724 =	46 (0.800)					intergenic (‑125/+31)	PP_0907/PP_0908	RND transporter membrane fusion protein‑like protein/hypothetical protein

AAGGCCGAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGACAACCACCTGCATCTCGTCTGATTTTTCTGTTGCATTCACTGGCCTTCTCCCAGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTTTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1049826‑1049671 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctttagcTGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCCCAGAAGCCGGACGGCAGGTTCATCGGTTGCCCGACCAGTTCGGCCTTGCGGCAATCGTAGAACCGGCAGCGGCCCTGCCCGGAGGT  >  NC_002947/1049724‑1049865                                                                                                                                                                                                                                                                                                            AAGGCCGAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGACAACCACCTGCATCTCGTCTGATTTTTCTGTTGCATTCACTGGCCTTCTCCCAGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGG                                                                                                                                                       <  1:190408/149‑1   GGCCGAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGACAACCACCTGCATCTCGTCTGATTTTTCTGTTGCATTCACTGGCCTTCTCCCAGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCT                                                                                                                                                     <  7:94814/149‑1    GCCGAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGACAACCACCTGCATCTCGTCTGATTTTTCTGTTGCATTCACTGGCCTTCTCCCAGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTT                                                                                                                                                    <  5:305176/149‑1      CGAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGACAACGACCTGCATCTCGTCTGATTTTTCTGTTGCATTCACTGGCCTTCTCCCAGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTTTA                                                                                                                                                  <  7:5619/149‑1      CGAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGACAACCACCTGCATCTCGTCTGATTTTTCTGTTGCATTCACTGGCCTTCTCCCAGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTTTA                                                                                                                                                  <  5:347377/149‑1      CGAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGAACACCACCTGCATCTCGTCGGGTTTTTATGTTGCATTAACAGGCCTTCTCCCAGCTAAAGCCGATACCAAAGGGGTCTACACCTTACCTGTTGGAGCGGCTT                                                                                                                                                    >  1:81015/1‑147       GAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGACAACCACCTGCATCTCGTCTGATTTTTCTGTTGCATTCACTGGCCTTCTCCCAGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTTTAG                                                                                                                                                 <  5:95372/149‑1                                                                                                       AGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTTTAGCTGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCCCCGAAGCCGGACGGCAGGTTCATCGGTTGCCCGCCCAGT                                                 >  6:265540/1‑149                                                                                                         CTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTTTAGCTGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCC                                                                                        >  3:118842/1‑108                                                                                                         CTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTTTAGCTGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCC                                                                                        <  4:118842/108‑1                                                                                                            AAGCAGATCCCACAGGGTTCTACACAGTCACTGTAGGAGCGGCTTTAGCTGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCCCAGAAGCCGGACGGCAGGTTCATCGGTTGCCCGACCAGTTCGG                                             >  1:313334/1‑148                                                                                                                                                    GGCTTTAGCTGGGAGAAGGCCAGGGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCCCAGAAGCCGGACGGCAGGTTCATCGGTTGCCCGACCAGTTCGGCCTTGCGGCAATCGTAGAACCGGCAGCGGCCCTGCCCGGAG    <  7:68696/149‑1                                                                                                                                                      CTTTAGCTGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCCCAGAAGCCGGACGGCAGGTTCATCGGTTGCCCGACCAGTTCGGCCTTGCGGCAATCGTAGAACCGGCAGCGGCCCTGCCCGGAG    >  5:392479/1‑147                                                                                                                                                      CTTTAGCTGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCCCAGAAGCCGGACGGCAGGTTCATCGGTTGCCCGACCAGTTCGGCCTTGCGGCAATCGTAGAACCGGCAGCGGCCCTGCCCGGAG    <  6:392479/147‑1                                                                                                                                                      CTTTAGCGGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCCCAGAAGCCGGACGGCAGGTTCATCGGTTGCCCGACCAGTTCGGCCTTGCGGCAATCGTAGAACCGGCAGCGGCCCTGCCCGGAGGT  >  8:224569/1‑149                                                                                                                                                                                                                                                                                                            AAGGCCGAACTGGTCGGGCAACCGATGAACCTGCCGTCCGGCTTCTGGGACAACCACCTGCATCTCGTCTGATTTTTCTGTTGCATTCACTGGCCTTCTCCCAGCTAAAGCCGATCCCACAGGGTTCTACACAGTCCCTGTAGGAGCGGCTTTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1049826‑1049671 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctttagcTGGGAGAAGGCCAGTGAATGCAACAGAAAAATCAGACGAGATGCAGGTGGTTGTCCCAGAAGCCGGACGGCAGGTTCATCGGTTGCCCGACCAGTTCGGCCTTGCGGCAATCGTAGAACCGGCAGCGGCCCTGCCCGGAGGT  >  NC_002947/1049724‑1049865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.