New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1397909 = | 67 (1.080) | 4 (0.070) | 4/248 | NT | 6.5% | coding (857/1119 nt) | tolA | colicin S4/filamentous phage transport protein |
? | NC_002947 | 1397951 = | 52 (0.900) | coding (899/1119 nt) | tolA | colicin S4/filamentous phage transport protein |
ACCGCAGCCACCGCCGAACTGTCATACGGGCCGTCACCACTGGACCGGGCCACGCTGACATTGGTGATGGTACCGTCCGGCAACATGTTGATCTGCAGGACCACCGTCATGCCCTTGCGCGCGGAAGGCGGACGTGCCCAGCCCTCGGCCGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1398065‑1397909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcgcaAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCGGTGAAGAACATTGGTCGTTTGACCGAGATGCAG > NC_002947/1397951‑1398096 ACCGCAGCCACCGCCGAACTGTCATACGGGCCGTCACCACTGGACCGGGCCACGCTGACATTGGTGATGGTACCGTCCGGCAACATGTTGATCTGCAGGACCACCGTCATGCCCTTGCGCGCGGAAGGCGGACGTGCCCAGCCCTCGGC < 8:263134/149‑1 CACCGCCGAACTGTCATACGGGCCGTCACCACTGGAACGGGCCACGCTGACATTGGTGATGGTACCGTCCGGCAACATGTTGATCTGCAGGACCACCGTCATGCCCTTGCGCGCGGAAGGCGGACGTGCCCAGCCCTCGGCCGCGCGCA > 1:260169/1‑149 CTTGCGCGCGGAAGGCGGACGTGCCCAGCCCTCGGCCGCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCA < 5:321138/119‑1 CTTGCGCGCGGAAGGCGGACGTGCCCAGCCCTCGGCCGCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCA > 6:321138/1‑119 TGCGCGCGGAAGGCGGACGTGCCCAGCCCTCGGCCGCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACAAATGTCAGCGTGGCCCGGTCCAGTTGTGACGGCCCGTATGAAAGTTCGGCGGTG > 3:26936/1‑149 GCGCGGAAGGCGGACGTGCCCAGCCCTCGGCCGCGCGCAAGTGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCT > 2:208631/1‑149 CCGCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCGGTGAAGAACATTGGTCGTTTGACCG < 4:265145/147‑1 CGCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCGGTGAAGAACATTGGTCGTTTGACCGAG < 7:263134/148‑1 GCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCG < 1:241188/120‑1 GCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCG > 2:241188/1‑120 CGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCGGTGAAGAACATTGGTCGTTTGACCGAGATG > 7:328221/1‑149 gctCAAGGGCATGACGGTGGTCCTGCAGATCATGTTGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCGGTGTATATCATTGGTCGTTTGACCGAGATGC < 5:209270/146‑1 GCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCGGTGAAGAACATTGGTCGTTTGACCGAGATGCAG < 2:237217/149‑1 GCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCGGTGAAGAACATTGGTCGTTTGACCGAGATGCAG < 6:157092/149‑1 ACCGCAGCCACCGCCGAACTGTCATACGGGCCGTCACCACTGGACCGGGCCACGCTGACATTGGTGATGGTACCGTCCGGCAACATGTTGATCTGCAGGACCACCGTCATGCCCTTGCGCGCGGAAGGCGGACGTGCCCAGCCCTCGGCCGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1398065‑1397909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcgcaAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCAGCGTGGCCCGGTCCAGTGGTGACGGCCCGTATGACAGTTCGGCGGTGGCTGCGGTGAAGAACATTGGTCGTTTGACCGAGATGCAG > NC_002947/1397951‑1398096 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |