New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1407835	56 (0.900)	3 (0.050)	3/254	NT	5.2%	coding (288/1509 nt)	PP_1230	hypothetical protein
	?	NC_002947	= 1407875	56 (0.950)					coding (328/1509 nt)	PP_1230	hypothetical protein

CAAAAAGGCCCTGGTCAGTACCGGTGGTAGCATGAGCATCGAGCGTGTGTCGCTGGAGCAGCATCTCTTCAGCAGCACTGCCCAGTACCGGCTCAAGGCTCGCGACATCAATGTGGGGCAGGGCGAGGTGATCAATTTTGACGTGGGCGTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1407682‑1407835 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgaccTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACGCCCACGTCAAAATTGATCACCTCGCCCTGCCCCACATTGATGTCGCGAGCCTTGAGCCGGTACTGGGCAGTGCTGCTGAAGAGATGCTGCTCCAGCGACAC  <  NC_002947/1407875‑1407728                                                                                                                                                                                                                                                                                                                 CAAAAAGGCCCTGGTCAGTACCGGTGGTAGCATGAGCATCGAGCGTGTGTCGCTGGAGCAGCATCTCTTCAGCAGCACTGCCCAGTACCGCCTCAAGGCTCGCGACATCAATGTGGGCCAGCGCGAGGTGATCAATTTTGACGTGGGCG                                                                                                                                                            >  2:164206/1‑149   AAAAGGCCCTGGTCAGTACCGGTGGTAGCATGAGCATCGAGCGTGTGTCGCTGGAGCAGCATCTCTTCAGCAGCACTGCCCAGTACCGGCTCAAGGCTCGCGACATCAATGTGGGGCAGGGCGAGGTGATCAATTTTGACGTGGGCGT                                                                                                                                                           >  5:85541/1‑148       GGCCCTGGTCAGTACCGGTGGTAGCATGAGCATCGAGCGTGTGTCGCTGGAGCAGCATCTCTTCAGCAGCACTGCCCAGTACCGGCTCAAGGCTCGCGACATCAATGTGGGGCAGGGCGAGGTGATCAATTTTGACGTGGGCGTGACC                                                                                                                                                       >  5:87637/1‑148                                                     CTGGAGCAGCATCTCTTCAGCAGCACTGCCCAGTACCGGCTCAAGGCTCGCGACATCAATGTGGGGCAGGGCGAGGTGATCAATTTTGACGTGGGCGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACG                                                                                                       <  6:85541/149‑1                                                                TCTCTTCAGCAGCACTGCCCAGTACCGGCTCAAGGCTCGCGACATCAATGTGGGGCAGGGCGAGGTGATCAATTTTGACGTGGGCGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACGCCCACGTCAA                                                                                             >  3:349828/1‑148                                                                    TTCAGCAGCACTGCCCAGTACCGGCTCAAGGCTCGCGACATCAATGTGGGGCAGGGCGAGGTGATCAATTTTGACGTGGGCGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACGCCCACGTCAAAA                                                                                           <  4:349828/146‑1                                                                                                                                                     GTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACGCCCACGTCAAAATTGATCACCTCGCCCTGCCCCACATTGATGTCGCGAGCCTTGAGCCGGTACTGGGCAGTGCTGCTGAAGAGATGCTGCTCCAGC       >  4:261730/1‑149                                                                                                                                                     GTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACGCCCACGTCAAAATTGATCACCTCGCCCTGCCCCACATTGATGTCGCGAGCCTTGAGCCGGTACTGGGCAGTGCTGCTGAAGAGATGCTGCTCCAGC       <  4:357811/149‑1                                                                                                                                                        ACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACGCCCACGTCAAAATTGATCACCTCGCCCTGCCCCACATTGATGTCGCGAGCCTTGAGCCGGTACTGGGCAGTGCTGCTGAAGAGATGCTGCTCCAGCGA     <  3:261730/148‑1                                                                                                                                                        ACCTGACCCGCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACGCCCACGTCAAAATTGATCACCTCGCCCTGCCCCACATTGATGTCGCGAGCCTTGAGCCGGTACTGGGCAGTGCTGCTGAAGAGATGCTGCTCCAGCGA     <  7:150848/148‑1                                                                                                                                                          CTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGATCACGCCCACGTCAAAATTGATCACCTCGCCCTGCCCCACATTGATGTCGCGAGCCTTGAGCCGGTACTGGGCAGTGCTGCTGAAGAGATGCTGCTCCAGCGACA   >  1:74133/1‑149                                                                                                                                                          CTGACCCTCCACCCCGGACACGGGCCGTGCTCGATCTCGTCGG‑TCACGCCCACGTCAAAATTGATCACCTCGCCCTGCCCCACATTGATGTCGCGAGCCTTGAGCCGGTACTGGGCAGTGCTGCTGAAGAGATGCTGCTCCAGCGACAC  <  4:293767/149‑1                                                                                                                                                                                                                                                                                                                 CAAAAAGGCCCTGGTCAGTACCGGTGGTAGCATGAGCATCGAGCGTGTGTCGCTGGAGCAGCATCTCTTCAGCAGCACTGCCCAGTACCGGCTCAAGGCTCGCGACATCAATGTGGGGCAGGGCGAGGTGATCAATTTTGACGTGGGCGTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1407682‑1407835 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgaccTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGG‑TCACGCCCACGTCAAAATTGATCACCTCGCCCTGCCCCACATTGATGTCGCGAGCCTTGAGCCGGTACTGGGCAGTGCTGCTGAAGAGATGCTGCTCCAGCGACAC  <  NC_002947/1407875‑1407728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.