New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1432030 = | 58 (0.940) | 3 (0.050) | 3/250 | NT | 5.0% | coding (110/1092 nt) | xenA | protein XenA |
? | NC_002947 | 1432071 = | 59 (1.010) | coding (151/1092 nt) | xenA | protein XenA |
GCCTGCACCACCGGTACGAACGCCTGAGCGTGGGCATCGCTCCAGATACCGGCGCAACCGGGGGTGATACGCCCTTCCGGCGCCACAGCAGTGGCCTCGACCACCAGCAAGCCGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1432183‑1432030 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggtgccGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCGGGTATC > NC_002947/1432071‑1432214 GCCTGCACCACCGGTACGAACGCCTGAGCGTGGGCATCGCTCCAGATACCGGCGCAACCGGGGGTGATACGCCCTTCCGGCGCCACAGCAGTGGCCTCGACCACCAGCAAGCCGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTG > 8:173907/1‑149 CCTGCACCACCGGTACGAACGCCTGAGCGTGGGCATCGCTCCAGATACCGGCGCAACCGGGGGTGATACGCCCTTCCGGCGCCACAGCAGTGGCCTCGACCACCAGCAAGCCGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTGG > 1:67565/1‑149 CACCACCGGTACGAACGCCTGAGCGTGGGCATCGCTCCAGATACCGGCGCAACCGGGGGTGATACGCCCTTCCGGCGCCACAGCAGTGGCCTCGACCACCAGCAAGCCGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTGGTGC > 8:117725/1‑148 CACCACCGGTACGAACGCCTGAGCGTGGGCATCGCTCCAGATACCGGCGCAACCGGGGGTGATACGCCCTTCCGGCGCCACAGCAGTGGCCTCGACCACCAGCAAGCCGGCACCACCACGGGCCAGGACGGCCAGGTGAACGTGGTGC > 8:316791/1‑148 ACCACCGGTACGAACGCCTGAGCGTGGGCATCGCTCCAGATACCGGCGCAACCGGGGGTGATACGCCCTTCCGGCGCCACAGCAGTGGCCTCGACCACCAGCAAGCCGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTGGTGC > 2:213876/1‑147 CAAGCCGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGG < 3:112323/119‑1 CAAGCCGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGG > 4:112323/1‑119 CGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGT > 1:245083/1‑149 GTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCGGGT < 8:116426/149‑1 GTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCGGGTATC < 8:196502/149‑1 GCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCGGGTATC > 4:21001/1‑147 GCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCC > 3:14579/1‑135 GCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCC < 4:14579/135‑1 CCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCGGGTATC > 5:341112/1‑146 GCCTGCACCACCGGTACGAACGCCTGAGCGTGGGCATCGCTCCAGATACCGGCGCAACCGGGGGTGATACGCCCTTCCGGCGCCACAGCAGTGGCCTCGACCACCAGCAAGCCGGCACCACCACGGGCCAGGCCGGCCAGGTGAACGTGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1432183‑1432030 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggtgccGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGGAAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCGGGTATC > NC_002947/1432071‑1432214 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |