New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 147178777 (1.240)5 (0.080) 3/254 NT 6.0% coding (1040/1491 nt) alg8 glycosyltransferase Alg8
?NC_002947 = 1471817 83 (1.400)coding (1010/1491 nt) alg8 glycosyltransferase Alg8

AGAAGGCCATGCCGAACTTGAGGCTGGCGATTACCGCCACGGTCAGGCCCAGCAGGCTGGTCCACATCGACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1471635‑1471787
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcaAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAAAACTCACGGGCACTGGGCCTTGGCCTGCGTCGCCTGGGGCTGTTCACCAGCATCGTGTTGTTCGACCAGCGCGTGTCGATGTGGACCAGCCTGCTGGGCCTGACCGTGG  <  NC_002947/1471817‑1471671
                                                                                                                                                                                                                                                                                                            
AGAAGGCCATGCCGAACTTGAGGCTGGCGATTACCGCCACGGTCAGGCCCAGCAGGCTGGTCCACATCGACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGC                                                                                                                                                         <  2:296947/149‑1
        ATGCCGAACTTGAGGCTGGCGATTACCGCCACGGTCAGGCCCAGCAGGCTGGTCCACATCGACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGCCGCAgatt                                                                                                                                                 >  5:294775/1‑145
                                          TCAGGCCCAGCAGGCTGGTCCACATCGACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGCCGCAAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAA                                                                                                               <  1:308747/149‑1
                                                                     ACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGCCGCAAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAAA                                                                                                              <  3:137718/123‑1
                                                                     ACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGCCGCAAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAAA                                                                                                              <  3:143408/123‑1
                                                                     ACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGCCGCAAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAAA                                                                                                              >  4:137718/1‑123
                                                                     ACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGCCGCAAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAAA                                                                                                              >  4:143408/1‑123
                                                                                                                                                    CCGCAAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAAAACTCACGGGCACTGGGCCTTGGCCTGCGTCGCCTGGGGCTGTTCACCAGCATCGTGTTGTTCGACCAGCGCGTGTCGATGTGGACCAGCCTGCTGGGCCTGACCG     >  7:215294/1‑149
                                                                                                                                                       CAAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAAAACTCACGGGCACTGGGCCTTGGCCTGCGTCGCCTGGGGCTGTTCACCAGCATCGTGTTGTTCGACCAGCGCGTGTCGATGTGGACCAGCCTGCTGGGCCTGACCGTGG  <  4:130625/149‑1
                                                                                                                                                                                                                                                                                                            
AGAAGGCCATGCCGAACTTGAGGCTGGCGATTACCGCCACGGTCAGGCCCAGCAGGCTGGTCCACATCGACACGCGCTGGTCGAACAACACGATGCTGGTGAACAGCCCCAGGCGACGCAGGCCAAGGCCCAGTGCCCGTGAGTTTTGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1471635‑1471787
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcaAGCTGATGTACCGCTGGTACGGCAACAACCTGCGGCAAAACTCACGGGCACTGGGCCTTGGCCTGCGTCGCCTGGGGCTGTTCACCAGCATCGTGTTGTTCGACCAGCGCGTGTCGATGTGGACCAGCCTGCTGGGCCTGACCGTGG  <  NC_002947/1471817‑1471671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.