| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1483147 | 51 (0.820) | 4 (0.070) | 4/258 | NT | 7.1% | coding (321/1029 nt) | yhdW | amino acid ABC transporter‑binding protein YhdW |
| ? | NC_002947 | = 1483179 | 55 (0.910) | coding (353/1029 nt) | yhdW | amino acid ABC transporter‑binding protein YhdW | |||||
GATCGTCGGCATCGATGCCGATGTCTGCCGCGCCGTGGCCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1482997‑1483147‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCCA < NC_002947/1483179‑1483032 GATCGTCGGCATCGATGCCGATGTCTGCCGCGCCGTGGCCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCA > 5:383304/1‑149 ATCGTCGGCATCGATGCCGATGTCTGCCGCGCCGTGGCCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCAC > 3:60485/1‑149 CCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTG < 6:173542/149‑1 CGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGG < 1:142299/149‑1 GCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGT > 1:210016/1‑136 GCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGT < 2:210016/136‑1 cCCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGCGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGC < 4:253764/148‑1 ACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCCGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCGTGGCGTTGAGCTGGCTGAACTTGCCCTTGGTGGCATCGCCGAACACGGCGGCGGC < 6:318500/149‑1 ACCAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGC > 7:20044/1‑149 CAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCCA > 2:376401/1‑149 CAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCCA > 4:340840/1‑149 GATCGTCGGCATCGATGCCGATGTCTGCCGCGCCGTGGCCGCCGCCGTGTTCGGCGATGCCACCAAGGTCAAGTTCAGCCAGCTCAACGCCAAGGAACGCTTCACTGCCCTGCAGTCGGGCGAGGTCGACGTACTGTCGCGTAACACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1482997‑1483147‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccAGGCCCATGCCGGCATCGCGCGAGCTGGTCCAGGTGGTGTTACGCGACAGTACGTCGACCTCGCCCGACTGCAGGGCAGTGAAGCGTTCCTTGGCGTTGAGCTGGCTGAACTTGACCTTGGTGGCATCGCCGAACACGGCGGCGGCCA < NC_002947/1483179‑1483032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |