| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1542122 = | 73 (1.180) | 4 (0.070) | 4/256 | NT | 5.8% | intergenic (+12/‑99) | PP_1352/PP_1353 | hypothetical protein/membrane protein |
| ? | NC_002947 | 1542163 = | 59 (0.990) | intergenic (+53/‑58) | PP_1352/PP_1353 | hypothetical protein/membrane protein | |||||
CGTCTGGGATTGGCGGACGAGCTGATCGACTTCAGCGTTCAAATCCATATTCATCTCCTGATGCCGAGCGGCAAGTACACGGTTGAACAGGCCGCGCGTGTTATTACGCAACCCCGGCCCCCATGGACATCATTTGGCCATCGGGGTTCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1542274‑1542122‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggGTTGCGTAATAACACGCGCGGCCTGTTCAACCGTGTACTTGCCGCTCGGCATCAGGAGATGAATATGGATTTGAACGCTGAAGTCGATCAGCTCGTCCGCCAATCCCAGACGTGGATTCCCTTGATCATGGAATACGGCAGCCGTGT > NC_002947/1542163‑1542309 CGTCTGGGATTGGCGGACGAGCTGATCGACTTCAGCGTTCAAATCCATATTCATCTCCTGATGCCGAGCGGCAAGTACACGGTTGAACAGGCCGCGCGTGTTATTACGCAACCCCGGCCCCCATGGACATCATTTGGCCATCGGGGTTC < 7:336600/149‑1 GTCTGGGATTGGCGGACGAGCTGATCGACTTCAGCGTTCAAATCCATATTCATCTCCTGATGCCGAGCGGCAAGTACACGGTTGAACAGGCCGCGCGTGTTATTACGCAACCCCGGCCCCCATGGACATCATTTGGCCATCGGGGTTCC > 7:73229/1‑149 AACCCCGGCCCCCATGGACATCATTTGGCCATCGGGGTTCCGGGGTTGCGTAATAACACGCGCGGCCTGTTCAACCGTGTACTTGCCGCTCGGCATCAG < 3:311643/99‑1 AACCCCGGCCCCCATGGACATCATTTGGCCATCGGGGTTCCGGGGTTGCGTAATAACACGCGCGGCCTGTTCAACCGTGTACTTGCCGCTCGGCATCAG > 4:311643/1‑99 CCCCGGCCCCCATGGACATCATTTGGCCATCGGGGTTCCGGGGTTGCGTAATAACACGCGCGGCCTGTTCAACCGTGTACTTGCCGCTCGGCATCAGGAGATGAATATGGATTTGAACGCTGAAGTCGA < 7:200536/129‑1 CCCCGGCCCCCATGGACATCATTTGGCCATCGGGGTTCCGGGGTTGCGTAATAACACGCGCGGCCTGTTCAACCGTGTACTTGCCGCTCGGCATCAGGAGATGAATATGGATTTGAACGCTGAAGTCGA > 8:200536/1‑129 GGGTTGCGTAATAACACGCGCGGCCTGTTCAACCGTGTACTTGCCGCTCGGCATCAGGAGATGAATATGGATTTGAACGCTGAAGTCGATCAGCTCGTCCGCCAATCCCAGACGTTGATTCCCTTGATCATGGAATACGGCAGCCGTGT < 8:190328/149‑1 CGTCTGGGATTGGCGGACGAGCTGATCGACTTCAGCGTTCAAATCCATATTCATCTCCTGATGCCGAGCGGCAAGTACACGGTTGAACAGGCCGCGCGTGTTATTACGCAACCCCGGCCCCCATGGACATCATTTGGCCATCGGGGTTCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1542274‑1542122‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggGTTGCGTAATAACACGCGCGGCCTGTTCAACCGTGTACTTGCCGCTCGGCATCAGGAGATGAATATGGATTTGAACGCTGAAGTCGATCAGCTCGTCCGCCAATCCCAGACGTGGATTCCCTTGATCATGGAATACGGCAGCCGTGT > NC_002947/1542163‑1542309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |