New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1750108 =	79 (1.270)	4 (0.070)	4/254	NT	5.0%	coding (128/852 nt)	PP_1549	Cro/CI family transcriptional regulator
	?	NC_002947	1750155 =	76 (1.280)					coding (81/852 nt)	PP_1549	Cro/CI family transcriptional regulator

GACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1750261‑1750108 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgcGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCT  >  NC_002947/1750155‑1750302                                                                                                                                                                                                                                                                                                                GACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGG                                                                                                                                                           >  5:284628/1‑149    AAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTTC                                                                                                                                                        <  6:288044/149‑1    AAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTTC                                                                                                                                                        >  7:269773/1‑149      GCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTTCGC                                                                                                                                                      >  5:193112/1‑149             TGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTT                                                                                                                                                         >  7:320541/1‑139             TGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTT                                                                                                                                                         <  8:320541/139‑1                                                                                                      GACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTAC                                                        >  7:346904/1‑147                                                                                                         ATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTTCGCGATGTCGCGTTTGACATTACGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGT                                                   >  5:134847/1‑149                                                                                                                       CGGAATCAGCTATGAGGCTGTCCGCCAGTGGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCAT                                     >  4:182195/1‑149                                                                                                                               GCTATGAGGCTGTCCGCCAGTGGTTCGCGATGTCGCGTTTGACATTACGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTT                             <  6:134847/149‑1                                                                                                                                                      TTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAAT      >  7:8159/1‑149                                                                                                                                                       TCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGATTGTTTTGAATATGCAAGCATGCTTGAATG     >  6:218564/1‑149                                                                                                                                                         GCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGC    <  8:118248/148‑1                                                                                                                                                          CGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCT  <  6:216110/149‑1                                                                                                                                                          CGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCT  <  6:221243/149‑1                                                                                                                                                                                                                                                                                                                GACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAGCTATGAGGCTGTCCGCCAGTGGTTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1750261‑1750108 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgcGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCT  >  NC_002947/1750155‑1750302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.