New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1924472 =	59 (0.950)	4 (0.070)	4/254	NT	6.8%	coding (397/840 nt)	PP_1724	2‑aminoethylphosphonate ABC transporter permease
	?	NC_002947	1924505 =	54 (0.910)					coding (364/840 nt)	PP_1724	2‑aminoethylphosphonate ABC transporter permease

CTCGGCGCCTATTCACTGCGCCAGGTGGACTCGAAGCTGCGCGACTTCGTCAGCGCCTTCGCCAACATGACCAGCAACTTTGCCGGCGTACCGCTGGCCTTTGCCTTCATCATCCTGCTTGGCTTCAACGGCGCGCTGACGCTGCTGCTGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1924625‑1924472 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaagcCAAGCAGGATGATGAAGGCAAAGGCCAGCGGTACGCCGGCAAAGTTGCTGGTCATGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGCAGTGAATAGGCGCCGAGGGTAGCGATGACGATGCCGAACACG  >  NC_002947/1924505‑1924650                                                                                                                                                                                                                                                                                                              CTCGGCGCCTATTCACTGCGCCAGGTGGACTCGAAGCTGCGCGACTTCGTCAGCGCCTTCGCCAACATGACCAGCAACTTTGCCGGCGTACCGCTGGCCTTTGCCTTCATCATCCTGCTTGGCTTCAACGGCGCGCTGACGCTGCTGCT                                                                                                                                                         >  2:218623/1‑149  TCGGCGCCTATTCACTGCGCCAGGTGGACTCGAAGCTGCGCGACTTCGTCAGCGCCTTCGCCAACATGACCAGCAACTTTGCCGGCGTACCGCTGGCCTTTGCCTTCATCATCCTGCTTGGCTTCAACGGCGCGCTGACGCTGCTGCT                                                                                                                                                         >  5:21848/1‑148    GGCGCCTATTCACTGCGCCAGGTGGACTCGAAGCTGCGCGACTTCGTCAGCGCCTTCGCCAACATGACCAGCAACTTTGCCGGCGTACCGCTGGCCTTTGCCTTCATCATCCTGCTTGGCTTCAACGGCGCGCTGACGCTGCTGCTG                                                                                                                                                        <  4:175873/147‑1                                                                                                              TCATCCTGCTTGGCTTCAACGGCGCGCTGACGCTGCTGCTGAAGCCAAGCAGGATGATGAAGGCAAAGGCCAGCGGTACGCCGGCAAAGTTGCTGGTCAGGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGC                                            >  7:348734/1‑149                                                                                                                     GCTTGGCTTCAACGGCGCGCTGACGCTGCTGCTGAAGCCAAGCAGGATGATGAAGGCAAAGGCCAGCGGTACGCCGGCAAAGTTGCTGGTCATGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGCAGTGAA                                      >  1:294589/1‑148                                                                                                                      CTTGGCTTCAACGGCGCGCTGACGCTGCTGCTGAAGCCAAGCAGGATGATGAAGGCAAAGGCCAGAGGTACGCCGGCAAAGTTGCTGGTCATGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGCAGTGAgaa                                    >  7:256988/1‑146                                                                                                                      CTTCGCTTCAACGGCGCGCTGACGCTGCTGCTGAAGCCAAGCAGGATGATGAAGGCAAAGGCCAGCGGTACGCCGGCAAAGTTGCTGGTCATGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGCAGT                                         <  8:256988/144‑1                                                                                                                                                       AAGCCAAGCAGGATGATGAAGGCAAAGGCCAGCGGTACGCCGGCAAAGTTGCTGGTCATGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGCAGTGAATAGGCGCCGAGGGTAGCGATGACGATGCCGAACAC   >  6:382692/1‑149                                                                                                                                                        AGCCAAGCAGGATGATGAAGGCAAAGGCCAGCGGTACGCCGGCAAAGTTGCTGGTCATGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGCAGTGAATAGGCGCCGAGGGTAGCGATGACGATGCCGAACACG  <  3:175873/149‑1                                                                                                                                                        AGCCAAGCAGGATGATGAAGGCAAAGGCCAGCGGTACGCCGGCAAAGTTGCTGGTCATGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGCAGTGAATAGGCGCCGAGGGTAGCGATGACGATGCCGAACACG  <  4:80897/149‑1                                                                                                                                                                                                                                                                                                              CTCGGCGCCTATTCACTGCGCCAGGTGGACTCGAAGCTGCGCGACTTCGTCAGCGCCTTCGCCAACATGACCAGCAACTTTGCCGGCGTACCGCTGGCCTTTGCCTTCATCATCCTGCTTGGCTTCAACGGCGCGCTGACGCTGCTGCTGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1924625‑1924472 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaagcCAAGCAGGATGATGAAGGCAAAGGCCAGCGGTACGCCGGCAAAGTTGCTGGTCATGTTGGCGAAGGCGCTGACGAAGTCGCGCAGCTTCGAGTCCACCTGGCGCAGTGAATAGGCGCCGAGGGTAGCGATGACGATGCCGAACACG  >  NC_002947/1924505‑1924650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.