| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2039986 | 84 (1.350) | 5 (0.080) | 5/256 | NT | 5.4% | coding (88/339 nt) | PP_1813 | ComEA‑like protein |
| ? | NC_002947 | = 2040019 | 93 (1.560) | coding (121/339 nt) | PP_1813 | ComEA‑like protein | |||||
ACCCGCTAGGGTTGGTTGCGCAGCCGAAGGAAAGCGGTTGCTGGAAAATGACCAACCCAAGGAGTGTTGACCATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2039836‑2039986‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCCACCGGCACCGGTTCGGGCACAGCCATGGTGCTGGCCGGGGCGGCGCTCAGGGAGAACGACAGACTGGCGAACAGCGGCAGCAGCAGGTACGACAGAACGTTATTGCGCATGGTCAACACTCCTTGGGTTGGTCATTTTCCAGCAAC < NC_002947/2040019‑2039872 ACCCGCTAGGGTTGGTTGCGCAGCCGAAGGAAAGCGGTTGCTGGAAAATGACCAACCCAAGGAGTGTTGACCATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGC > 2:247403/1‑149ACCCGCTAGGGTTGGTTGCGCAGCCGAAGGAAAGCGGTTGCTGGAAAATGACCAACCCAAGGAGTGTTGACCATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGC > 7:265586/1‑149 GGAAAATGACCAACCCAAGGAGTGTTGACCATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGCCACCACCGGCACCGGTTCGGGCACAGCCATGGTGCTGGC > 5:390997/1‑146 GGAAAATGACCAACCCAAGGAGTGTTGACCATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGCCACCACCGGCACCGGTTCGGGCACAGCCATGGTGCTGGC < 6:390997/146‑1 AAAATGACCAACCCAAGGAGTGTTGACCATGCGCAATAACGTGCTGGCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGC‑‑‑‑‑‑‑‑‑GCCACCACCGGCACCGGGTCGGGCACAGCCATGGTGCTGGCCGGGGCGGCGCTCA < 5:34647/149‑1 ACCCAAGGAGTGTTGACCATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGC > 3:127635/1‑95 ACCCAAGGAGTGTTGACCATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGC < 4:127635/95‑1 ATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGCCACCACCGGCACCGGTTCGGGCACAGCCATGGTGCTGGCCGG > 1:263598/1‑119 ATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGCCACCACCGGCACCGGTTCGGGCACAGCCATGGTGCTGGCCGG < 2:263598/119‑1 GGCCACCACCGGCACCGGTTCGGGCACAGCCATGGTGCTGGCCGGGGCGGCGCTCAGGGAGAACGACAGACTGGCGAACAGCGGCAGCAGCAGGTACGACAGAACGTTATTGCGCATGGTCAACACTCCTTGGGTTGGTCATTTTCCA < 7:1742/148‑1 ACCACCGGCACCGGTTCGGGCACAGCCATGGTGCTGGCCGGGGCGGCGCTCAGGGAGAACGACAGACTGGCGAACAGCGGCAGCAGCAGGTACGACAGAACGTTATTGCGCATGGTCAACACTCCTTGGGTTGGTCATTTTCCAGCAAC < 8:200064/149‑1 ACCCGCTAGGGTTGGTTGCGCAGCCGAAGGAAAGCGGTTGCTGGAAAATGACCAACCCAAGGAGTGTTGACCATGCGCAATAACGTTCTGTCGTACCTGCTGCTGCCGCTGTTCGCCAGTCTGTCGTTCTCCCTGAGCGCCGCCCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2039836‑2039986‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCCACCGGCACCGGTTCGGGCACAGCCATGGTGCTGGCCGGGGCGGCGCTCAGGGAGAACGACAGACTGGCGAACAGCGGCAGCAGCAGGTACGACAGAACGTTATTGCGCATGGTCAACACTCCTTGGGTTGGTCATTTTCCAGCAAC < NC_002947/2040019‑2039872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |