| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2115056 | 56 (0.900) | 5 (0.090) | 5/248 | NT | 8.3% | coding (576/1806 nt) | PP_1883 | hypothetical protein |
| ? | NC_002947 | = 2115078 | 58 (1.000) | coding (598/1806 nt) | PP_1883 | hypothetical protein | |||||
CTCAATCCCGAAGGCATATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2114901‑2115056‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggccgaTATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCAGACTCCTGCACTTCCAGTACTTGCTCGAACGGCACACCTGGCAAGGACTCGTTGAGCCAGGGCTCCCAACTCAGGAAAACCTTGTCATCTTTGGCCATGGCGGCATAGGGC < NC_002947/2115078‑2114933 CTCAATCCCGAAGGCATATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCC > 3:203034/1‑149CTCAATCCCGAAGGCATATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATC < 4:85427/148‑1CTCAATCCCGAAGGCATATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATC < 4:370096/148‑1 CAATCCCTCAGGCTTATTGCGGCCCACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTG < 6:266509/149‑1 AATCCCGAAGGCATATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGG < 2:248384/149‑1 AATCCCGAAGGCATATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCT < 2:231819/147‑1 CCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGAT < 3:360039/149‑1 CCGCCATGCCCAAAGCTGACAAGGTTTTCCTGAGTTGGGAGCCCGGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGA < 7:105763/148‑1 CGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATC < 6:307496/149‑1 GGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCA < 1:115040/109‑1 GGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCA > 2:115040/1‑109 CCTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCAGACTCCTGCACTTCCAGTACTTGCTCGAACGGCACACCTGGCAAGGACTCGTTGAGCCAGGGCTCCCAACTCAGGAAAACCTTGTCATCTTTGGCCATGGCGGCA < 3:4379/149‑1 CTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCAGACTCCTGCACTTCCAGTACTTGCTCGAACGGCACACCTGGCAAGGACTCGTTGAGCCAGGGCTCCCAACTCAGGAAAACCTTGTCATCTTTGGCCATGGCGGCAT > 4:27681/1‑149 CTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCA < 1:367154/43‑1 CTGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCA > 2:367154/1‑43 TGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCAGACTCCTGCACTTCCAGTACTTGCTCGAACGGCACACCTGGCAAGGACTCGTTGAGCCAGGGCTCCCAACTCAGGAAAACCTTGTCATCTTTGGCCATGGCGGCATA > 7:95721/1‑149 TGGCCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCAGACTCCTGCACTTCCAGTACTTGCTCGAACGGCACACCTGGCAAGGACTCGTTGAGCCAGGGCTCCCAACTCAGGAAAACCTTGTCATCTTTGGCCATGGCGGCA > 2:341198/1‑147 CCGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCAGACTCCTGCACTTCCAGTACTTGCTCGAACGGCACACCTGGCAAGGACTCGTTGAGCCAGGGCTCCCAACTCAGGAAAACCTTGTCATCTTTGGCCATGGCGGCATAGGG > 3:129931/1‑149 CGATATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCAGACTCCTGCACTTCCAGTACTTGCTCGAACGGCACACCTGGCAAGGACTCGTTGAGCCAGGGCTCCCAACTCAGGAAAACCTTGTCATCTTTGGCCATGGCGGCATAGGGC > 4:231435/1‑149 CTCAATCCCGAAGGCATATTGCTGGCAACAGCGCCCTATGCCGCCATGGCCAAAGATGACAAGGTTTTCCTGAGTTGGGAGCCCTGGCTCAACGAGTCCTTGCCAGGTGTGCCGTTCGAGCAAGTACTGGAAGTGCAGGAGTCTGATCCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2114901‑2115056‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggccgaTATCCAGGTGCCACAGCAGTGGTCGGCCAGGATCAGACTCCTGCACTTCCAGTACTTGCTCGAACGGCACACCTGGCAAGGACTCGTTGAGCCAGGGCTCCCAACTCAGGAAAACCTTGTCATCTTTGGCCATGGCGGCATAGGGC < NC_002947/2115078‑2114933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |