New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2140805 = | 62 (1.000) | 3 (0.050) | 3/252 | NT | 5.2% | coding (541/2214 nt) | PP_1897 | DNA internalization‑related competence protein ComEC/Rec2 |
? | NC_002947 | 2140850 = | 51 (0.870) | coding (586/2214 nt) | PP_1897 | DNA internalization‑related competence protein ComEC/Rec2 |
GCCGATGTGCTGGCCGGAAATCACCAACAGGTGCACCGTGCCGGTGGCCTGCAACGTCTGCCAGTCCTCACGGGCCAGGCCCGCACCGTCGCCAAGCACCAGTGCCACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2140957‑2140805 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgctgGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCGGGCTG > NC_002947/2140850‑2140996 GCCGATGTGCTGGCCGGAAATCACCAACAGGTGCACCGTGCCGGTGGCCTGCAACGTCTGCCAGTCCTCACGGGCCAGGCCCGCACCGTCGCCAAGCACCAGTGCCACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGC > 3:56371/1‑149 GCCGATGTGCTGGCCGGAAATCACCAACAGGTGCACCGTGCCGGTGGCCTGCAACGTCTGCCAGTCCTCACGGGCCAGGCCCGCACCGTCGCCAAGCACCAGTGCCACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGC < 5:262000/149‑1 ACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCGGTTGGTGATTTCCGGCCAGCA > 5:238832/1‑148 CCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCTGGCCTGGCCCGTGAGGACTGGCAGCCGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCAC > 2:255630/1‑148 GCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCG > 2:478/1‑149 AGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCG < 3:261531/149‑1 AGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCG < 6:74118/149‑1 TGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCGGGCTG > 7:33190/1‑149 GCCGATGTGCTGGCCGGAAATCACCAACAGGTGCACCGTGCCGGTGGCCTGCAACGTCTGCCAGTCCTCACGGGCCAGGCCCGCACCGTCGCCAAGCACCAGTGCCACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2140957‑2140805 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgctgGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCGGGCTG > NC_002947/2140850‑2140996 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |