| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2140805 = | 62 (1.000) | 3 (0.050) | 3/252 | NT | 5.2% | coding (541/2214 nt) | PP_1897 | DNA internalization‑related competence protein ComEC/Rec2 |
| ? | NC_002947 | 2140850 = | 51 (0.870) | coding (586/2214 nt) | PP_1897 | DNA internalization‑related competence protein ComEC/Rec2 | |||||
GCCGATGTGCTGGCCGGAAATCACCAACAGGTGCACCGTGCCGGTGGCCTGCAACGTCTGCCAGTCCTCACGGGCCAGGCCCGCACCGTCGCCAAGCACCAGTGCCACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2140957‑2140805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgctgGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCGGGCTG > NC_002947/2140850‑2140996 GCCGATGTGCTGGCCGGAAATCACCAACAGGTGCACCGTGCCGGTGGCCTGCAACGTCTGCCAGTCCTCACGGGCCAGGCCCGCACCGTCGCCAAGCACCAGTGCCACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGC > 3:56371/1‑149GCCGATGTGCTGGCCGGAAATCACCAACAGGTGCACCGTGCCGGTGGCCTGCAACGTCTGCCAGTCCTCACGGGCCAGGCCCGCACCGTCGCCAAGCACCAGTGCCACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGC < 5:262000/149‑1 ACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCGGTTGGTGATTTCCGGCCAGCA > 5:238832/1‑148 CCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCTGGCCTGGCCCGTGAGGACTGGCAGCCGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCAC > 2:255630/1‑148 GCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCG > 2:478/1‑149 AGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCG < 3:261531/149‑1 AGCGCTGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCG < 6:74118/149‑1 TGGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCGGGCTG > 7:33190/1‑149 GCCGATGTGCTGGCCGGAAATCACCAACAGGTGCACCGTGCCGGTGGCCTGCAACGTCTGCCAGTCCTCACGGGCCAGGCCCGCACCGTCGCCAAGCACCAGTGCCACCAGCGCTGCCTGCCGGCCATTGGCTTCGACCATCAGCAAGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2140957‑2140805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgctgGTGGCACTGGTGCTTGGCGACGGTGCGGGCCTGGCCCGTGAGGACTGGCAGACGTTGCAGGCCACCGGCACGGTGCACCTGTTGGTGATTTCCGGCCAGCACATCGGCCTGGTCGCCGGTTTGCTCTATGGCCTGGTCGCCGGGCTG > NC_002947/2140850‑2140996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |