New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2235728 =60 (0.970)3 (0.050) 3/250 NT 5.3% coding (839/2016 nt) uvrB uvrABC excinuclease protein B
?NC_002947 2235765 = 50 (0.860)coding (876/2016 nt) uvrB uvrABC excinuclease protein B

CATCGGGCGGCAGGTAATCGTACAGGGTGGGCGGCGGCGCCCCGGCCGGGCGCCCGGACAGGTAACGCGAGTAGTTTTCGATGCCGTTGCAGTAGCCCAGCTCGAGGATCATCTCCAGATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2235883‑2235728
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcttcgaTCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGGCGCCGCCGCCCACCCTGTACGATTACCTGCCGCCCGATGCGCTGCTGGTGATCGACGAATCAC  >  NC_002947/2235765‑2235907
                                                                                                                                                                                                                                                                                                           
CATCGGGCGGCAGGTAATCGTACAGGGTGGGCGGCGGCGCCCCGGCCGGGCGCCCGGACAGGTAACGCGAGTAGTTTTCGATGCCGTTGCAGTAGCCCAGCTCGAGGATCATCTCCAGATCGAAGCGGGTGCGTTGCTCCAGACGCTGC                                                                                                                                                        <  8:117966/149‑1
      GCGGCAGGTAATCGTACAGGGTGGGCGGCGGCGCCCCGGCCGGGCGCCCGGACAGGTAACGCGAGTAGTTTTCGATGCCGTTGCAGTAGCCCAGCTCGAGGATCATCTCCAGATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTC                                                                                                                                                   >  6:132749/1‑148
                                                                                                                    AGATCGAAGCGGGTGCGTTGCTGCAGACGCAGCGCTTCGATATGGAGATGAACCACGAGCTGGGCTACTGCAACGGCATCAAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGG                                                                 >  7:58155/1‑120
                                                                                                                    AGATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTCGATCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGG                                                                 <  8:58155/120‑1
                                                                                                                     GATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTCGATCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGGCGCCGCCGCCCACCCTGTACGATTACCTGC                                   >  5:140355/1‑149
                                                                                                                                                      CTTCGATCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGGCGCCGCCGCCCACCCTGTACGATTACCTGCCGCCCGATGCGCTGCTGGTGATCGACGAATCAC  <  1:44226/149‑1
                                                                                                                                                                                                                                                                                                           
CATCGGGCGGCAGGTAATCGTACAGGGTGGGCGGCGGCGCCCCGGCCGGGCGCCCGGACAGGTAACGCGAGTAGTTTTCGATGCCGTTGCAGTAGCCCAGCTCGAGGATCATCTCCAGATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2235883‑2235728
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcttcgaTCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGGCGCCGCCGCCCACCCTGTACGATTACCTGCCGCCCGATGCGCTGCTGGTGATCGACGAATCAC  >  NC_002947/2235765‑2235907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.