New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2235728 = | 60 (0.970) | 3 (0.050) | 3/250 | NT | 5.3% | coding (839/2016 nt) | uvrB | uvrABC excinuclease protein B |
? | NC_002947 | 2235765 = | 50 (0.860) | coding (876/2016 nt) | uvrB | uvrABC excinuclease protein B |
CATCGGGCGGCAGGTAATCGTACAGGGTGGGCGGCGGCGCCCCGGCCGGGCGCCCGGACAGGTAACGCGAGTAGTTTTCGATGCCGTTGCAGTAGCCCAGCTCGAGGATCATCTCCAGATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2235883‑2235728 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcttcgaTCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGGCGCCGCCGCCCACCCTGTACGATTACCTGCCGCCCGATGCGCTGCTGGTGATCGACGAATCAC > NC_002947/2235765‑2235907 CATCGGGCGGCAGGTAATCGTACAGGGTGGGCGGCGGCGCCCCGGCCGGGCGCCCGGACAGGTAACGCGAGTAGTTTTCGATGCCGTTGCAGTAGCCCAGCTCGAGGATCATCTCCAGATCGAAGCGGGTGCGTTGCTCCAGACGCTGC < 8:117966/149‑1 GCGGCAGGTAATCGTACAGGGTGGGCGGCGGCGCCCCGGCCGGGCGCCCGGACAGGTAACGCGAGTAGTTTTCGATGCCGTTGCAGTAGCCCAGCTCGAGGATCATCTCCAGATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTC > 6:132749/1‑148 AGATCGAAGCGGGTGCGTTGCTGCAGACGCAGCGCTTCGATATGGAGATGAACCACGAGCTGGGCTACTGCAACGGCATCAAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGG > 7:58155/1‑120 AGATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTCGATCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGG < 8:58155/120‑1 GATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTCGATCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGGCGCCGCCGCCCACCCTGTACGATTACCTGC > 5:140355/1‑149 CTTCGATCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGGCGCCGCCGCCCACCCTGTACGATTACCTGCCGCCCGATGCGCTGCTGGTGATCGACGAATCAC < 1:44226/149‑1 CATCGGGCGGCAGGTAATCGTACAGGGTGGGCGGCGGCGCCCCGGCCGGGCGCCCGGACAGGTAACGCGAGTAGTTTTCGATGCCGTTGCAGTAGCCCAGCTCGAGGATCATCTCCAGATCGAAGCGGGTGCGTTGCTCCAGACGCTGCGCTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2235883‑2235728 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcttcgaTCTGGAGATGATCCTCGAGCTGGGCTACTGCAACGGCATCGAAAACTACTCGCGTTACCTGTCCGGGCGCCCGGCCGGGGCGCCGCCGCCCACCCTGTACGATTACCTGCCGCCCGATGCGCTGCTGGTGATCGACGAATCAC > NC_002947/2235765‑2235907 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |